Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QN218_RS16915 Genome accession   NZ_CP126534
Coordinates   3336864..3337004 (-) Length   46 a.a.
NCBI ID   WP_225516634.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain BSY82     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3331864..3342004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN218_RS16910 - 3335746..3336918 (-) 1173 Protein_3315 condensation domain-containing protein -
  QN218_RS16915 comS 3336864..3337004 (-) 141 WP_225516634.1 competence protein ComS Regulator
  QN218_RS16920 srfAB 3337096..3340140 (-) 3045 Protein_3317 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5274.07 Da        Isoelectric Point: 9.2422

>NTDB_id=838586 QN218_RS16915 WP_225516634.1 3336864..3337004(-) (comS) [Bacillus inaquosorum strain BSY82]
MNRSSKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=838586 QN218_RS16915 WP_225516634.1 3336864..3337004(-) (comS) [Bacillus inaquosorum strain BSY82]
TTGAACCGATCAAGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978