Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QN218_RS11010 Genome accession   NZ_CP126534
Coordinates   2125498..2126082 (-) Length   194 a.a.
NCBI ID   WP_003238902.1    Uniprot ID   A0A9Q4HW25
Organism   Bacillus inaquosorum strain BSY82     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2120498..2131082
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN218_RS10985 mobB 2120894..2121415 (-) 522 WP_060398530.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QN218_RS10990 glp 2121376..2122668 (-) 1293 WP_060398529.1 gephyrin-like molybdotransferase Glp -
  QN218_RS10995 - 2122686..2123705 (-) 1020 WP_060398528.1 molybdopterin-synthase adenylyltransferase MoeB -
  QN218_RS11000 - 2123756..2124355 (-) 600 WP_060398527.1 molybdenum cofactor guanylyltransferase -
  QN218_RS11005 - 2124491..2125456 (+) 966 WP_060398526.1 hypothetical protein -
  QN218_RS11010 rok 2125498..2126082 (-) 585 WP_003238902.1 transcriptional regulator Rok Regulator
  QN218_RS11015 - 2126535..2126993 (-) 459 WP_060398525.1 redoxin domain-containing protein -
  QN218_RS11020 ahpA 2127063..2127605 (-) 543 WP_003238905.1 biofilm-specific peroxidase AhpA -
  QN218_RS11025 mscT 2127849..2128652 (+) 804 WP_060400020.1 small-conductance mechanosensitive channel protein MscT -
  QN218_RS11030 - 2128689..2128934 (-) 246 WP_003238909.1 YkuS family protein -
  QN218_RS11035 - 2128995..2130119 (-) 1125 WP_060398524.1 N-acetyldiaminopimelate deacetylase -
  QN218_RS11040 dapD 2130189..2130899 (-) 711 WP_060398523.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22145.10 Da        Isoelectric Point: 9.7169

>NTDB_id=838564 QN218_RS11010 WP_003238902.1 2125498..2126082(-) (rok) [Bacillus inaquosorum strain BSY82]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEVKKDFRSERKTDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=838564 QN218_RS11010 WP_003238902.1 2125498..2126082(-) (rok) [Bacillus inaquosorum strain BSY82]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTACGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATCGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAGTCAAAAAGGATTTCC
GTTCTGAACGAAAAACTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAACAGCAGTCTGTACAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCTGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCGAAAGCAGCTAAGCTGCGTGAAGCTGCCATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGTGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAAGGTGAAATCGAATCAGCTGA
ATCTGCAGAATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

98.413

97.423

0.959