Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QPL78_RS07815 Genome accession   NZ_CP126530
Coordinates   1498205..1498780 (+) Length   191 a.a.
NCBI ID   WP_105954142.1    Uniprot ID   -
Organism   Bacillus halotolerans strain Tehuacan_S4     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1493205..1503780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL78_RS07785 (QPL78_07785) dapD 1493377..1494087 (+) 711 WP_024121226.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  QPL78_RS07790 (QPL78_07790) - 1494158..1495282 (+) 1125 WP_044156065.1 N-acetyldiaminopimelate deacetylase -
  QPL78_RS07795 (QPL78_07795) - 1495343..1495588 (+) 246 WP_010334064.1 YkuS family protein -
  QPL78_RS07800 (QPL78_07800) - 1495623..1496426 (-) 804 WP_024121228.1 mechanosensitive ion channel family protein -
  QPL78_RS07805 (QPL78_07805) ahpA 1496671..1497213 (+) 543 WP_010334066.1 biofilm-specific peroxidase AhpA -
  QPL78_RS07810 (QPL78_07810) ykuV 1497295..1497753 (+) 459 WP_024121229.1 thiol-disulfide oxidoreductase YkuV -
  QPL78_RS07815 (QPL78_07815) rok 1498205..1498780 (+) 576 WP_105954142.1 transcriptional regulator Rok Regulator
  QPL78_RS07820 (QPL78_07820) - 1498822..1499787 (-) 966 WP_024121231.1 hypothetical protein -
  QPL78_RS07825 (QPL78_07825) - 1499920..1500519 (+) 600 WP_103671625.1 molybdenum cofactor guanylyltransferase -
  QPL78_RS07830 (QPL78_07830) - 1500571..1501590 (+) 1020 WP_101865198.1 MoeB/ThiF family adenylyltransferase -
  QPL78_RS07835 (QPL78_07835) glp 1501608..1502900 (+) 1293 WP_284560579.1 gephyrin-like molybdotransferase Glp -
  QPL78_RS07840 (QPL78_07840) mobB 1502861..1503382 (+) 522 WP_284560580.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21757.71 Da        Isoelectric Point: 9.8783

>NTDB_id=838477 QPL78_RS07815 WP_105954142.1 1498205..1498780(+) (rok) [Bacillus halotolerans strain Tehuacan_S4]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSETKKEFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSAQPQLQSISSLPAGIPDGATRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGDIESAESATE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=838477 QPL78_RS07815 WP_105954142.1 1498205..1498780(+) (rok) [Bacillus halotolerans strain Tehuacan_S4]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGATTAGAACAATTAAATGAAGCTGAAGTAAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAACGAAAAAGGAGTTCC
GTTCTGAAAGAAAAACTGACTCTCTGCCAGTTCTCGCCGAGCTTGCAGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCCGCCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGATGGAGCGACTAGAAGAAG
AAGAGGAACGGCAAGACCGGGATCTAAAGCAGCTAAACTGCGTGAAGCAGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGTTTAATTAAAATGTATCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGTGACATCGAATCAGCTGA
ATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

95.288

100

0.953