Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   QPL78_RS06330 Genome accession   NZ_CP126530
Coordinates   1233316..1233972 (+) Length   218 a.a.
NCBI ID   WP_024120921.1    Uniprot ID   A0A9Q4HP90
Organism   Bacillus halotolerans strain Tehuacan_S4     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1228316..1238972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL78_RS06300 (QPL78_06300) oppF 1228779..1229696 (+) 918 WP_284560485.1 oligopeptide ABC transporter ATP-binding protein OppF -
  QPL78_RS06305 (QPL78_06305) - 1229803..1231020 (+) 1218 WP_284560758.1 MFS transporter -
  QPL78_RS06310 (QPL78_06310) - 1231185..1231763 (+) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  QPL78_RS06315 (QPL78_06315) spx 1231943..1232338 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  QPL78_RS06320 (QPL78_06320) - 1232381..1233037 (-) 657 WP_044156385.1 TerC family protein -
  QPL78_RS06325 (QPL78_06325) - 1233224..1233349 (+) 126 WP_120698858.1 hypothetical protein -
  QPL78_RS06330 (QPL78_06330) mecA 1233316..1233972 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  QPL78_RS06335 (QPL78_06335) coiA 1234130..1235281 (+) 1152 WP_284560486.1 competence protein CoiA family protein Machinery gene
  QPL78_RS06340 (QPL78_06340) pepF 1235511..1237340 (+) 1830 WP_169793538.1 oligoendopeptidase F -
  QPL78_RS06345 (QPL78_06345) - 1237376..1237543 (-) 168 WP_101863858.1 hypothetical protein -
  QPL78_RS06350 (QPL78_06350) spxH 1237857..1238756 (-) 900 WP_284560487.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25879.69 Da        Isoelectric Point: 4.0810

>NTDB_id=838471 QPL78_RS06330 WP_024120921.1 1233316..1233972(+) (mecA) [Bacillus halotolerans strain Tehuacan_S4]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQEVNQEEKEQKLQFVLRFDDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFYNLTDEEVENQLSILLEYASESSISIHRLEEYGKLVVSEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=838471 QPL78_RS06330 WP_024120921.1 1233316..1233972(+) (mecA) [Bacillus halotolerans strain Tehuacan_S4]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTATGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTATTCTGGGAAGTTATGGATGAAGTTCATGAGGAAGAGGAAT
TCGCTGTTGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATTATCGTCACCAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGAAGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGGTTTG
ATGACTTCGAAGATGTAATTTCTCTATCTAAATTAAACGTTAACGGAAGTAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTGGATTTTTACAATTTGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGTC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAATACGGCAAGCTGGTTGTATCAGAGCACGCTCTTGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

96.789

100

0.968