Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QPL78_RS06220 Genome accession   NZ_CP126530
Coordinates   1211855..1212046 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus halotolerans strain Tehuacan_S4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1206855..1217046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL78_RS06190 (QPL78_06190) argF 1207687..1208643 (+) 957 WP_024120900.1 ornithine carbamoyltransferase -
  QPL78_RS06195 (QPL78_06195) - 1208744..1208923 (+) 180 WP_003239319.1 YjzC family protein -
  QPL78_RS06200 (QPL78_06200) - 1208969..1209154 (-) 186 WP_010333727.1 YjzD family protein -
  QPL78_RS06205 (QPL78_06205) - 1209413..1210150 (+) 738 WP_095713629.1 hypothetical protein -
  QPL78_RS06210 (QPL78_06210) - 1210233..1210796 (+) 564 WP_284560480.1 hypothetical protein -
  QPL78_RS06215 (QPL78_06215) med 1210887..1211840 (+) 954 WP_101863851.1 BMP family ABC transporter substrate-binding protein Regulator
  QPL78_RS06220 (QPL78_06220) comZ 1211855..1212046 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  QPL78_RS06225 (QPL78_06225) - 1212076..1212306 (-) 231 WP_081638273.1 hypothetical protein -
  QPL78_RS06230 (QPL78_06230) fabH 1212472..1213410 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  QPL78_RS06235 (QPL78_06235) fabF 1213433..1214671 (+) 1239 WP_284560481.1 beta-ketoacyl-ACP synthase II -
  QPL78_RS06240 (QPL78_06240) - 1214750..1215535 (+) 786 WP_284560482.1 DUF2268 domain-containing protein -
  QPL78_RS06245 (QPL78_06245) appD 1215725..1216711 (+) 987 WP_101863853.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=838468 QPL78_RS06220 WP_003224559.1 1211855..1212046(+) (comZ) [Bacillus halotolerans strain Tehuacan_S4]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=838468 QPL78_RS06220 WP_003224559.1 1211855..1212046(+) (comZ) [Bacillus halotolerans strain Tehuacan_S4]
ATGCAGCACGAAAAATCACTTGAGTTTCTGCAAATAGCAATGAAATATCTGCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGAATAGAGCTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGGCGGAAGCCTATGAGCTGG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1