Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   QPL78_RS02045 Genome accession   NZ_CP126530
Coordinates   397080..397220 (+) Length   46 a.a.
NCBI ID   WP_223203921.1    Uniprot ID   -
Organism   Bacillus halotolerans strain Tehuacan_S4     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 392080..402220
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL78_RS02040 (QPL78_02040) srfAB 393944..397036 (+) 3093 Protein_358 surfactin non-ribosomal peptide synthetase SrfAB -
  QPL78_RS02045 (QPL78_02045) comS 397080..397220 (+) 141 WP_223203921.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5202.01 Da        Isoelectric Point: 9.3565

>NTDB_id=838454 QPL78_RS02045 WP_223203921.1 397080..397220(+) (comS) [Bacillus halotolerans strain Tehuacan_S4]
MNRSGKHLISSIILFPRPSGECTSSISLDKQAQATTSLLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=838454 QPL78_RS02045 WP_223203921.1 397080..397220(+) (comS) [Bacillus halotolerans strain Tehuacan_S4]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTTTCCCCGGCCCAGCGGAGAATGTACATCCTCAATCAG
CTTGGACAAGCAAGCACAAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGAGAAGTAA

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913