Detailed information NTG0838391

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: QPL83_RS27450
• Genome accession: NZ_CP126524
• Coordinates: 4989966..4991315 (-)
• Length: 449 a.a.
• NCBI ID: WP_284555579.1
• Uniprot ID: -
• Organism: Bacillus toyonensis strain Monterrey_S3
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4984966..4996315

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPL83_RS27430 (QPL83_27430)	secA	4985295..4987802 (-)	2508	WP_000579396.1	preprotein translocase subunit SecA	-
QPL83_RS27435 (QPL83_27435)	raiA	4988077..4988619 (-)	543	WP_000671188.1	ribosome-associated translation inhibitor RaiA	-
QPL83_RS27440 (QPL83_27440)	cspC	4988938..4989135 (-)	198	WP_002045823.1	cold shock protein CspC	-
QPL83_RS27445 (QPL83_27445)	-	4989262..4989966 (-)	705	WP_000543519.1	ComF family protein	-
QPL83_RS27450 (QPL83_27450)	comFA	4989966..4991315 (-)	1350	WP_284555579.1	ATP-dependent helicase ComFA	Machinery gene
QPL83_RS27455 (QPL83_27455)	-	4991442..4992836 (-)	1395	WP_141540479.1	C40 family peptidase	-
QPL83_RS27460 (QPL83_27460)	-	4992997..4993311 (-)	315	WP_000400852.1	helix-turn-helix domain-containing protein	-
QPL83_RS27465 (QPL83_27465)	-	4993483..4994325 (-)	843	WP_000844774.1	DegV family protein	-
QPL83_RS27470 (QPL83_27470)	-	4994564..4995199 (+)	636	WP_284555580.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 50961.74 Da
• Isoelectric Point: 9.6630

>NTDB_id=838391 QPL83_RS27450 WP_284555579.1 4989966..4991315(-) (comFA) [Bacillus toyonensis strain Monterrey_S3]
MLSGKQLLLEELSTDVRDNLDDLKKKGEVVCVQGVKNKASTYMCQRCGNIAQRLFSSFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAEKEGEMDVNPLQWKGNLSTGQELAAQGVMEAVKQKESFFIWAVCGAGKTEMLFYGIAEALQKGERVCIAT
PRTDVVLELAPRLKEVFPNINVAALYGGSLDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVKQAM
KEKAACIYLTATPDEEWKRNLRKGKRKGIVVSGRYHRHPLPVPKFCWCGNWKKSLINKRIPQVLLQWLKVYLNKKHPIFL
FVPHVRYIEKMSRLLKLLDDRVAGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGTEEEIFSESALV
QIAGRVGRSFEEPYGEVIYFHYGKTEAMVRAKKHIRSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=838391 QPL83_RS27450 WP_284555579.1 4989966..4991315(-) (comFA) [Bacillus toyonensis strain Monterrey_S3]
ATGTTATCTGGGAAACAGTTATTATTAGAAGAACTCTCTACAGACGTACGGGATAATTTAGATGATTTGAAGAAGAAGGG
AGAGGTCGTATGTGTACAAGGTGTAAAAAATAAGGCTTCTACATATATGTGTCAGCGTTGCGGAAATATAGCACAAAGAC
TCTTTTCGTCATTTTTGTGTAAAAGGTGTAGTAAAGTCTGCACATATTGCCGGAAGTGCATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTGCCGAAAAAGAAGGAGAAATGGATGTAAATCCGTTACAGTGGAAAGGAAATTT
ATCTACTGGCCAGGAGTTGGCTGCGCAAGGTGTTATGGAGGCTGTTAAACAGAAAGAATCGTTTTTTATTTGGGCTGTGT
GCGGCGCTGGAAAAACAGAAATGTTGTTTTATGGTATTGCAGAGGCACTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTACTTGAATTAGCACCGAGATTGAAAGAAGTATTTCCGAATATAAATGTAGCTGCTTTATACGG
TGGAAGTTTAGATCGGGAAAAAGATGCAGCGTTAGTCGTTGCGACCACCCATCAGCTATTGCGTTATTATAGAGCGTTTC
ATGTCATGATTGTAGATGAAATAGATGCCTTTCCATACCATGCAGATCAAATGTTGCAGTATGCGGTAAAACAAGCGATG
AAAGAGAAGGCCGCATGTATTTATTTAACTGCAACTCCAGATGAAGAGTGGAAGCGTAACCTTAGAAAGGGGAAACGAAA
AGGTATCGTTGTTTCTGGACGGTATCACCGTCATCCGTTGCCAGTCCCCAAATTTTGCTGGTGCGGAAACTGGAAGAAAA
GCCTCATCAATAAAAGAATTCCTCAAGTTTTACTACAATGGTTAAAAGTATACTTAAATAAAAAGCACCCCATTTTTTTA
TTTGTTCCCCATGTGCGATATATAGAAAAAATGAGTCGGTTATTGAAGCTGTTAGACGATAGAGTTGCCGGTGTGCATGC
AGAAGATCCAATGAGAAAAGAGAAAGTTGCAGCTTTCAGAAAGGGAGAAATTCCTTTATTAGTTACAACGACGATTTTGG
AGAGAGGAGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGACGGAAGAAGAAATATTTTCAGAAAGTGCACTCGTA
CAAATTGCAGGCCGGGTAGGTCGTAGTTTTGAAGAGCCGTATGGAGAGGTCATTTATTTTCATTATGGTAAGACAGAGGC
GATGGTGCGCGCGAAAAAACACATTCGAAGTATGAACAAAAATGCGAAAGAACAAGGGTTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (106-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.679	98.441	0.499
comFA	Latilactobacillus sakei subsp. sakei 23K	40.695	89.755	0.365