Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QPL83_RS22475 Genome accession   NZ_CP126524
Coordinates   4084605..4085399 (-) Length   264 a.a.
NCBI ID   WP_000411416.1    Uniprot ID   A0A1G4L491
Organism   Bacillus toyonensis strain Monterrey_S3     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4079605..4090399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL83_RS22455 (QPL83_22455) - 4079630..4080358 (-) 729 WP_000172596.1 glycerophosphodiester phosphodiesterase -
  QPL83_RS22460 (QPL83_22460) - 4080409..4080555 (+) 147 WP_001247671.1 YycC family protein -
  QPL83_RS22465 (QPL83_22465) - 4080767..4082092 (-) 1326 WP_000395075.1 glycosyltransferase -
  QPL83_RS22470 (QPL83_22470) - 4082292..4083710 (-) 1419 WP_001193753.1 membrane protein -
  QPL83_RS29060 - 4084095..4084359 (-) 265 Protein_4061 hypothetical protein -
  QPL83_RS22475 (QPL83_22475) spo0A 4084605..4085399 (-) 795 WP_000411416.1 sporulation transcription factor Spo0A Regulator
  QPL83_RS22480 (QPL83_22480) spoIVB 4085688..4086986 (-) 1299 WP_002048975.1 SpoIVB peptidase -
  QPL83_RS22485 (QPL83_22485) recN 4087105..4088844 (-) 1740 WP_000947741.1 DNA repair protein RecN Machinery gene
  QPL83_RS22490 (QPL83_22490) argR 4089106..4089555 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29427.13 Da        Isoelectric Point: 7.1176

>NTDB_id=838378 QPL83_RS22475 WP_000411416.1 4084605..4085399(-) (spo0A) [Bacillus toyonensis strain Monterrey_S3]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=838378 QPL83_RS22475 WP_000411416.1 4084605..4085399(-) (spo0A) [Bacillus toyonensis strain Monterrey_S3]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAGCCTGATGTACTCG
TTTTAGACATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTAACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACCTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACTAGTCATATTCGTCAAGTGAGTGGCAAGGCAAATGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACAATAGATGGAAAACCGAAAAACTTAGATGCAAGTATTACGAGTATTATTCATGAA
ATTGGTGTACCTGCTCATATTAAAGGATACATGTACTTACGAGAAGCGATTTCTATGGTGTACAATGATATCGAATTACT
AGGGTCTATTACGAAAGTATTATATCCAGATATTGCAAAGAAATATAATACAACAGCGAGCCGTGTCGAGCGTGCAATCC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGAAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1G4L491

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814