Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   QMM73_RS01610 Genome accession   NZ_AP027135
Coordinates   362364..363209 (+) Length   281 a.a.
NCBI ID   WP_061838576.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JP089     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 357364..368209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM73_RS01595 (JP089_03050) - 357630..359471 (-) 1842 WP_045177543.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  QMM73_RS01600 (JP089_03060) metC 359440..360600 (-) 1161 WP_281961757.1 cystathionine beta-lyase MetC -
  QMM73_RS01605 (JP089_03070) - 360597..361700 (-) 1104 WP_061838575.1 PLP-dependent transferase -
  QMM73_RS01610 (JP089_03080) spo0J 362364..363209 (+) 846 WP_061838576.1 ParB/RepB/Spo0J family partition protein Regulator
  QMM73_RS01615 (JP089_03090) - 363366..364247 (+) 882 WP_001077602.1 mechanosensitive ion channel family protein -
  QMM73_RS01620 (JP089_03100) - 364277..364480 (+) 204 WP_000157345.1 DUF951 domain-containing protein -
  QMM73_RS01625 (JP089_03110) ychF 364492..365589 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  QMM73_RS01630 (JP089_03120) - 365675..365866 (-) 192 WP_001052483.1 hypothetical protein -
  QMM73_RS01635 (JP089_03130) rpsF 366110..366406 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  QMM73_RS01640 (JP089_03140) ssbA 366427..366930 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  QMM73_RS01645 (JP089_03150) rpsR 366982..367224 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32927.92 Da        Isoelectric Point: 9.9382

>NTDB_id=83836 QMM73_RS01610 WP_061838576.1 362364..363209(+) (spo0J) [Staphylococcus aureus strain JP089]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQDYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFLRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=83836 QMM73_RS01610 WP_061838576.1 362364..363209(+) (spo0J) [Staphylococcus aureus strain JP089]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGATTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTCTAAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381

Multiple sequence alignment