Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QPL77_RS06660 Genome accession   NZ_CP126521
Coordinates   1354729..1355190 (-) Length   153 a.a.
NCBI ID   WP_012009774.1    Uniprot ID   A0AAE4B719
Organism   Bacillus pumilus strain Monterrey_S2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1349729..1360190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL77_RS06635 (QPL77_06635) - 1350338..1351222 (+) 885 WP_211063919.1 cation diffusion facilitator family transporter -
  QPL77_RS06640 (QPL77_06640) - 1351284..1351436 (-) 153 WP_186303696.1 hypothetical protein -
  QPL77_RS06645 (QPL77_06645) - 1351737..1352276 (+) 540 WP_144469948.1 RDD family protein -
  QPL77_RS06650 (QPL77_06650) - 1352402..1353712 (+) 1311 WP_211063918.1 MFS transporter -
  QPL77_RS06655 (QPL77_06655) - 1353786..1354694 (+) 909 WP_012009773.1 chemotaxis protein -
  QPL77_RS06660 (QPL77_06660) kre 1354729..1355190 (-) 462 WP_012009774.1 YkyB family protein Regulator
  QPL77_RS06665 (QPL77_06665) - 1355504..1355935 (+) 432 WP_284553829.1 hypothetical protein -
  QPL77_RS06670 (QPL77_06670) - 1356068..1356283 (-) 216 WP_211063916.1 hypothetical protein -
  QPL77_RS06675 (QPL77_06675) - 1356460..1356627 (+) 168 WP_211063926.1 hypothetical protein -
  QPL77_RS06680 (QPL77_06680) - 1356692..1357969 (-) 1278 WP_211063915.1 MFS transporter -
  QPL77_RS06685 (QPL77_06685) - 1358043..1358540 (-) 498 WP_211063914.1 L,D-transpeptidase family protein -
  QPL77_RS06690 (QPL77_06690) - 1358697..1359554 (-) 858 WP_211063913.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17741.33 Da        Isoelectric Point: 10.2452

>NTDB_id=838309 QPL77_RS06660 WP_012009774.1 1354729..1355190(-) (kre) [Bacillus pumilus strain Monterrey_S2]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQLLQTYVGLKEKPTATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=838309 QPL77_RS06660 WP_012009774.1 1354729..1355190(-) (kre) [Bacillus pumilus strain Monterrey_S2]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAATCCCAAGTTTCTTTATCTTTTGAAAAAACGTGCGCTGCAAAAACTGTTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAATATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACCAAAGAAGACTTCGAATTTTTGCCACATTTAGGAAATTTAAATCAGTCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAACTGCTTCAAACGTATGTCGGTTTAAAAGAAAAACCTACCGCCA
CAAAACAAAAATCACATTATACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

76.623

100

0.771