Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QPL77_RS04095 Genome accession   NZ_CP126521
Coordinates   866303..867094 (+) Length   263 a.a.
NCBI ID   WP_012009320.1    Uniprot ID   A8FB62
Organism   Bacillus pumilus strain Monterrey_S2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 861303..872094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL77_RS04060 (QPL77_04060) - 861389..861937 (+) 549 WP_144522561.1 thioredoxin family protein -
  QPL77_RS04065 (QPL77_04065) - 862274..862741 (+) 468 WP_144522560.1 DUF393 domain-containing protein -
  QPL77_RS04070 (QPL77_04070) - 862778..864034 (-) 1257 WP_211063677.1 transcriptional regulator -
  QPL77_RS04075 (QPL77_04075) - 864307..864894 (+) 588 WP_186325064.1 nitroreductase -
  QPL77_RS04080 (QPL77_04080) - 864932..865087 (-) 156 WP_012009317.1 YfhD family protein -
  QPL77_RS04085 (QPL77_04085) - 865149..865259 (-) 111 WP_211063676.1 YfhE family protein -
  QPL77_RS04090 (QPL77_04090) - 865312..866208 (-) 897 WP_144522557.1 TIGR01777 family oxidoreductase -
  QPL77_RS04095 (QPL77_04095) recX 866303..867094 (+) 792 WP_012009320.1 recombination regulator RecX Regulator
  QPL77_RS04100 (QPL77_04100) - 867098..867412 (+) 315 WP_088001663.1 YfhH family protein -
  QPL77_RS04105 (QPL77_04105) - 867435..867608 (-) 174 WP_003217811.1 YpzG family protein -
  QPL77_RS04110 (QPL77_04110) - 867634..867783 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  QPL77_RS04115 (QPL77_04115) - 867900..868172 (+) 273 WP_012009323.1 YfhJ family protein -
  QPL77_RS04120 (QPL77_04120) - 868463..869446 (+) 984 WP_003217835.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30746.17 Da        Isoelectric Point: 6.7755

>NTDB_id=838293 QPL77_RS04095 WP_012009320.1 866303..867094(+) (recX) [Bacillus pumilus strain Monterrey_S2]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIDIQFGDAVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIEDDHIEQALSQYPDDLQLEE
AVKQVQKLVRKEKNRSTKEIEQRIKLQLQRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMMEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=838293 QPL77_RS04095 WP_012009320.1 866303..867094(+) (recX) [Bacillus pumilus strain Monterrey_S2]
ATGCCCTATATTACAAAAATCTCTGCTCAAAAAAACAATACAGAGCGGGTGAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTGGATCTAGATGTGCTCGTTCAGCACGATTTGAAAAAAGGAAAAGAGCTGGACGAAGCCGATATCATCGACATTC
AATTCGGTGATGCTGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGGATGAGATCAGTGAAGGAAGTC
ACTGATTATTTGACGAAAAAAGAAATCCCGGCACCTGCCATTAGTGAAATTATACACAAATTAAAGCATTACAAGTATGT
AAATGATCTCGAATTTGCAGAAGCTTATGTCAGCACCCACCGTAAAACGAACAGCAAAGGGCCGTCCGTTCTGAAAAAAG
AGCTAAAGCTCAAAGGAATAGAGGATGACCACATTGAACAAGCACTATCGCAATATCCTGATGACTTACAGCTGGAGGAA
GCTGTGAAGCAGGTTCAGAAGCTTGTGAGAAAAGAAAAAAATCGTTCCACAAAAGAGATCGAGCAGCGCATCAAGCTACA
GTTGCAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCGCTCCTTTATATGATGGAGAAGGCAAAACGCAAGGTAGGATACGACGGGTCATTTGAAAAGAAGATGAAG
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGACACAATTGATCACGTTTTAGACAAAGGGGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8FB62

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

62.738

100

0.627