Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   QPL81_RS22045 Genome accession   NZ_CP126520
Coordinates   3896981..3897439 (+) Length   152 a.a.
NCBI ID   WP_284557030.1    Uniprot ID   -
Organism   Bacillus toyonensis strain Cuernavaca_S4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3891981..3902439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL81_RS22030 (QPL81_22030) - 3892644..3892880 (+) 237 WP_000283739.1 hypothetical protein -
  QPL81_RS22035 (QPL81_22035) - 3893049..3895157 (-) 2109 WP_000421687.1 polyphosphate kinase -
  QPL81_RS22040 (QPL81_22040) - 3895275..3896804 (-) 1530 WP_284557029.1 Ppx/GppA family phosphatase -
  QPL81_RS22045 (QPL81_22045) kre 3896981..3897439 (+) 459 WP_284557030.1 YkyB family protein Regulator
  QPL81_RS22050 (QPL81_22050) - 3897471..3898133 (-) 663 WP_000922477.1 YkyA family protein -
  QPL81_RS22055 (QPL81_22055) - 3898779..3899432 (-) 654 WP_000680808.1 diguanylate cyclase -
  QPL81_RS22060 (QPL81_22060) - 3899597..3899830 (+) 234 WP_000939445.1 SPP1 phage holin family protein -
  QPL81_RS22065 (QPL81_22065) - 3899862..3900362 (-) 501 WP_000708175.1 hypothetical protein -
  QPL81_RS22070 (QPL81_22070) - 3900797..3902338 (+) 1542 WP_000449889.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17844.49 Da        Isoelectric Point: 10.6490

>NTDB_id=838266 QPL81_RS22045 WP_284557030.1 3896981..3897439(+) (kre) [Bacillus toyonensis strain Cuernavaca_S4]
MKPSQPQSQLQNQHPINRLAQSIFVVNRHAKSATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYYFHIPPTKEDFRNLPHLGHLESSYRNPKTTLSLTVSRKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=838266 QPL81_RS22045 WP_284557030.1 3896981..3897439(+) (kre) [Bacillus toyonensis strain Cuernavaca_S4]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATCCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCCAAATCTGCAACTAACCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAGCGTTTAATCGCCGAAA
AAAAAGCAATTAAAGAAGGATTACATTTCTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGGTTA
GGCGATTATTATTTCCACATCCCTCCTACGAAAGAAGATTTTCGAAACCTACCACATCTTGGTCATCTTGAATCCTCCTA
CCGAAACCCGAAAACAACCTTGTCTTTAACAGTTTCCAGAAAAACACTTCAAGATTATATTGGTCCTGAAGCACTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGCCGCACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.602

74.342

0.48