Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   QMM94_RS10740 Genome accession   NZ_AP027134
Coordinates   2176148..2176618 (+) Length   156 a.a.
NCBI ID   WP_154284129.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JP008     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2171148..2181618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM94_RS10720 (JP008_20490) coaW 2171457..2172260 (+) 804 WP_086107320.1 type II pantothenate kinase -
  QMM94_RS10725 (JP008_20500) - 2172390..2173061 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  QMM94_RS10730 (JP008_20510) - 2173460..2174653 (-) 1194 WP_000183726.1 hypothetical protein -
  QMM94_RS10735 (JP008_20520) - 2174653..2175837 (-) 1185 WP_154284130.1 M20 family metallopeptidase -
  QMM94_RS10740 (JP008_20530) luxS 2176148..2176618 (+) 471 WP_154284129.1 S-ribosylhomocysteine lyase Regulator
  QMM94_RS10745 (JP008_20540) - 2176770..2177120 (-) 351 WP_001024035.1 membrane protein -
  QMM94_RS10750 (JP008_20550) - 2177134..2178435 (-) 1302 WP_154284128.1 pyrimidine-nucleoside phosphorylase -
  QMM94_RS10755 (JP008_20560) deoC 2178715..2179377 (-) 663 WP_154284127.1 deoxyribose-phosphate aldolase -
  QMM94_RS10760 (JP008_20570) deoD 2179692..2180402 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  QMM94_RS10765 (JP008_20580) - 2180524..2180967 (-) 444 WP_000070865.1 Dps family protein -
  QMM94_RS10770 (JP008_20590) - 2181167..2181580 (-) 414 WP_154284126.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17612.89 Da        Isoelectric Point: 5.7531

>NTDB_id=83825 QMM94_RS10740 WP_154284129.1 2176148..2176618(+) (luxS) [Staphylococcus aureus strain JP008]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTRK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=83825 QMM94_RS10740 WP_154284129.1 2176148..2176618(+) (luxS) [Staphylococcus aureus strain JP008]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAAGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404

Multiple sequence alignment