Detailed information NTG0838178

Bioinformatically predicted

Overview

• Name: rexA
• Type: Machinery gene
• Locus tag: VF946_RS04955
• Genome accession: NZ_CP141824
• Coordinates: 922399..926049 (-)
• Length: 1216 a.a.
• NCBI ID: WP_238716809.1
• Uniprot ID: -
• Organism: Streptococcus suis strain HB18
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 917399..931049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VF946_RS04935	fic	917918..918524 (-)	607	Protein_937	protein adenylyltransferase Fic	-
VF946_RS04940	-	918705..919517 (-)	813	WP_238716808.1	phosphate ABC transporter ATPase	-
VF946_RS04945	parE	919547..921490 (-)	1944	WP_012775063.1	DNA topoisomerase IV subunit B	-
VF946_RS04950	plsY	921633..922277 (+)	645	WP_012775062.1	glycerol-3-phosphate 1-O-acyltransferase PlsY	-
VF946_RS04955	rexA	922399..926049 (-)	3651	WP_238716809.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
VF946_RS04960	rexB	926049..929315 (-)	3267	WP_074412208.1	ATP-dependent nuclease subunit B	Machinery gene

Sequence

Protein

• Length: 1216 a.a.
• Molecular weight: 139815.04 Da
• Isoelectric Point: 5.0065

>NTDB_id=838178 VF946_RS04955 WP_238716809.1 922399..926049(-) (rexA) [Streptococcus suis strain HB18]
MAFEQFLSAEEIKAVQLAEANSDKQQKRTPEQIEAIYTQGQNVLVSASAGSGKTFVMVQRILDKLKRGIGIDQLFISTFT
VKAAGELKERIEKNLNETIAETTDMELRRHLSAQLADLTKADIGTMDSFTQKLVTTYGYSLGISPQFRILQDETEKASLK
KEVFDQLFTDYLEQDENGEFRKLVRNFSGNRKDNSGFRQVVYQVHDFSQSTSSPTKWLKEQAVQADLYSQERIEQILEQG
FKEKVLDKLYQATDFFRYHVEWGRNDFGSAKYFANVEEVLDLLTGLDSLDQKDLMERVERILLINDQSRGKGLTNANRPK
DEHLIAFKEEYNAGKSQIISGLRDLGQEVYELTLLKDYQVQALPLLVLLRDFVLDFSQAYLDVKIKEAAFEFGDIGHFAI
RILEENADIRQFFQEKYHEVMVDEYQDNNHSQERMLDLLSNGHNRFMVGDIKQSIYRFRQADPMIFQEKFELYQANPQDG
KLILLKENFRSQIEVLEATNAIFTRLMDRQVGEIKYDDTHSLVAGSPGQKITQPKHEMEYLIYDQQDSANSSTDAEEETP
LTAGEIEVVAKEIIRLHNEEGADFKDITLLVQKRTHNDLIMSIFEKHGIPIVADGGAASYLQSLEVMIMLDTLRVINNPL
NDYALVALLKSPMFRFDEDELTRISLQAGTGFFYQKMEIAHQTNGQHPELMSGELKKKIKDFLSILENWRAYAKLHSIYD
LIWKIFNEKFYYDYVGALPNGSKRQANLYALGLRANQYEKTGYKGLSRFIAMIDRALANDKDLADVQEFLPQNAVQLMTI
HKSKGLEFKYVFLMNIDKRFNLEDHYQSVIISRKNGLGIQYLADMKDKVNSPLPQVRVLMNTLPYQNNLQELKIANLSEQ
MRLLYVALTRAEKKLYLVGKGNADKLAEKYDGKKENGVLAQSTRESMATFQDWILAIDEAFSGEDLHFKKVFVTDEDLTE
EKIGKLTLKSKLEDASLKDIRQSEDIAQALDQLSSVQELNERYKAAIELPSLRTPSQIKKLYEPILEQEGMEVMEKYQPK
RTFNLPDFSKKPKITGAQVGSAVHELMQRLDLSWLVTEDTVRAALEAVHAEQAIKDKINVQMILDFFDIDLGREILANTD
KLHREAPFASLQTDSVSQENFVLRGIIDGYLLYDDHIVLFDYKTDKYDQPIQLSQRYQAQMQLYAEALKKAYKIDRVDCH
LILLGGERIEVVEVNI

Nucleotide

• Length: 3651 bp

>NTDB_id=838178 VF946_RS04955 WP_238716809.1 922399..926049(-) (rexA) [Streptococcus suis strain HB18]
ATGGCTTTTGAACAATTTTTAAGCGCGGAAGAAATCAAGGCTGTGCAGCTGGCGGAAGCCAATTCTGATAAGCAACAAAA
ACGCACACCTGAGCAGATTGAAGCCATCTACACGCAGGGTCAGAATGTTCTGGTCTCTGCATCGGCTGGGTCAGGCAAGA
CCTTCGTCATGGTTCAACGGATTTTGGATAAGTTGAAGCGTGGTATAGGGATTGACCAGCTCTTTATCTCGACCTTTACA
GTCAAGGCGGCTGGTGAGTTGAAGGAGCGGATCGAGAAAAATCTCAATGAAACCATTGCGGAGACGACCGATATGGAATT
GCGTCGGCATTTGTCGGCCCAGTTGGCAGATTTGACCAAGGCGGATATTGGGACCATGGACTCCTTTACGCAGAAATTGG
TAACGACTTACGGTTATAGCCTTGGTATTTCTCCGCAGTTTCGGATTTTACAGGATGAGACAGAAAAAGCAAGTCTAAAA
AAAGAGGTTTTTGACCAGCTCTTTACAGATTATCTTGAACAGGATGAAAATGGTGAGTTCCGCAAACTGGTTCGCAATTT
TTCGGGCAACCGTAAGGATAATAGTGGTTTCCGTCAGGTTGTTTATCAGGTGCATGATTTTAGCCAATCGACAAGCAGTC
CAACTAAATGGCTGAAAGAGCAGGCTGTTCAAGCTGATTTGTACAGTCAAGAGCGTATAGAGCAGATCTTAGAGCAAGGC
TTTAAGGAAAAAGTGTTAGACAAGCTCTATCAAGCTACAGATTTCTTCCGCTACCATGTAGAATGGGGCAGAAATGACTT
TGGTTCCGCTAAGTATTTTGCAAATGTGGAAGAAGTTTTAGATTTGCTGACAGGTTTAGATAGTCTGGACCAGAAGGACT
TGATGGAACGGGTTGAAAGAATCCTTCTCATCAATGACCAGTCCAGAGGAAAAGGCCTGACCAATGCCAATCGACCAAAA
GATGAGCATTTGATAGCCTTTAAAGAAGAATACAATGCTGGCAAGAGCCAGATTATCTCAGGACTACGAGATTTGGGGCA
AGAAGTTTATGAATTAACCCTGCTGAAAGATTATCAGGTTCAAGCTTTGCCACTGCTCGTATTATTACGTGACTTTGTCT
TGGATTTTTCGCAGGCTTATCTGGATGTCAAAATCAAGGAAGCAGCTTTTGAATTTGGCGATATTGGGCATTTCGCTATT
CGTATTTTAGAAGAAAATGCGGACATTCGCCAGTTTTTCCAAGAAAAATACCACGAAGTCATGGTGGACGAGTACCAGGA
TAACAACCATAGCCAAGAGCGAATGCTGGACCTGCTATCTAACGGTCACAACCGCTTTATGGTGGGCGATATTAAGCAGT
CCATCTATCGATTCCGTCAGGCGGATCCGATGATTTTCCAAGAGAAATTTGAACTGTATCAGGCAAATCCTCAGGATGGG
AAATTGATTTTACTCAAGGAAAATTTCCGTAGTCAGATTGAGGTCTTGGAGGCAACAAATGCTATTTTCACGCGTCTGAT
GGACCGTCAAGTAGGGGAAATCAAGTATGATGACACCCACAGTCTAGTGGCTGGTAGTCCTGGTCAAAAAATTACCCAGC
CCAAGCATGAGATGGAATACTTGATTTATGACCAGCAGGATAGCGCAAACTCTTCAACGGATGCTGAGGAGGAAACACCT
CTGACTGCTGGTGAAATTGAGGTCGTTGCAAAAGAGATTATTCGTCTTCACAATGAAGAAGGAGCAGACTTCAAGGACAT
CACTCTCTTGGTGCAAAAACGGACGCACAATGACCTCATTATGTCCATTTTTGAAAAACATGGGATTCCTATTGTGGCAG
ATGGCGGAGCAGCCTCCTATCTGCAATCTTTAGAAGTCATGATTATGCTGGATACCTTGAGGGTTATCAATAATCCACTC
AATGACTATGCCTTGGTTGCCCTTCTCAAATCGCCTATGTTCCGATTCGATGAAGATGAACTGACACGGATTTCCTTGCA
GGCTGGGACAGGTTTCTTTTACCAGAAAATGGAAATAGCCCATCAAACAAATGGGCAACATCCTGAACTTATGTCAGGAG
AGTTGAAGAAGAAAATCAAGGATTTCTTGTCTATTTTGGAAAACTGGCGTGCCTATGCCAAACTGCATTCTATTTATGAC
CTGATCTGGAAGATTTTCAATGAAAAATTCTACTATGACTATGTCGGTGCTCTTCCAAATGGCAGCAAGCGTCAGGCCAA
TCTATACGCACTAGGTCTGCGTGCCAACCAGTATGAAAAAACAGGCTACAAGGGCTTGTCCCGCTTCATCGCCATGATTG
ACCGTGCCTTAGCAAATGACAAGGATTTGGCAGATGTACAAGAGTTTCTACCGCAAAATGCTGTACAGCTTATGACCATT
CATAAGTCAAAAGGTCTGGAGTTCAAGTATGTCTTCCTCATGAACATCGATAAGCGATTTAACTTGGAAGACCATTACCA
ATCAGTCATCATCAGCCGGAAAAATGGTCTAGGTATCCAATATTTAGCAGATATGAAAGATAAGGTAAATAGCCCATTAC
CTCAGGTGCGAGTCTTAATGAACACCCTCCCTTATCAAAATAATCTCCAAGAGCTAAAAATTGCCAATCTTTCGGAACAA
ATGCGGTTGCTTTATGTTGCACTAACGCGTGCTGAGAAGAAGCTGTATCTGGTTGGAAAGGGTAATGCTGACAAGTTAGC
TGAAAAATACGATGGCAAAAAGGAAAATGGCGTACTAGCCCAATCAACTCGTGAAAGTATGGCGACCTTCCAAGACTGGA
TTCTAGCCATTGATGAGGCCTTCTCAGGAGAAGACTTGCACTTCAAGAAAGTCTTTGTGACGGATGAGGATTTGACAGAG
GAGAAGATTGGTAAACTTACATTGAAGAGTAAGCTAGAAGACGCCAGCCTTAAAGATATTCGTCAATCAGAAGACATCGC
CCAGGCCTTGGACCAGTTGTCTTCTGTCCAAGAGTTGAACGAACGCTATAAGGCTGCTATAGAATTGCCAAGTTTACGGA
CTCCAAGTCAAATCAAGAAGCTCTATGAGCCTATTTTGGAACAAGAAGGCATGGAAGTTATGGAAAAATACCAGCCCAAA
CGGACCTTCAACTTGCCAGATTTCTCCAAGAAACCAAAAATCACTGGAGCCCAAGTCGGTTCAGCAGTGCATGAACTCAT
GCAACGCTTGGATCTGTCTTGGTTGGTGACAGAAGATACGGTAAGAGCAGCCCTAGAAGCTGTTCATGCTGAGCAAGCGA
TTAAAGATAAAATCAATGTTCAGATGATTTTGGATTTCTTTGATATAGACTTAGGAAGAGAAATTCTAGCCAATACGGAC
AAACTCCACCGAGAAGCTCCATTTGCAAGTTTGCAGACAGATTCTGTATCTCAGGAAAACTTTGTCCTTCGTGGGATTAT
CGATGGCTACCTACTGTATGATGATCATATTGTCCTCTTTGATTACAAGACAGACAAATATGACCAACCAATCCAACTCA
GCCAACGTTACCAAGCTCAAATGCAACTCTATGCGGAGGCATTGAAAAAAGCCTACAAGATAGATCGTGTAGACTGCCAT
TTGATTTTGCTTGGTGGGGAGAGAATAGAAGTGGTCGAAGTCAACATATAG

Domains

Predicted by InterProScan.

• UvrD-like helicase C-terminal domain (UvrD_C) (483-897)

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (1037-1192)

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (29-471)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexA	Streptococcus pneumoniae R6	51.879	100	0.522