Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | QN340_RS03860 | Genome accession | NZ_CP126496 |
| Coordinates | 784351..786783 (+) | Length | 810 a.a. |
| NCBI ID | WP_020449838.1 | Uniprot ID | A0A6I7TTL1 |
| Organism | Bacillus paralicheniformis strain DY4 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 779351..791783
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN340_RS03845 (QN340_03845) | - | 782230..782694 (+) | 465 | WP_020449835.1 | CtsR family transcriptional regulator | - |
| QN340_RS03850 (QN340_03850) | - | 782709..783263 (+) | 555 | WP_003178271.1 | UvrB/UvrC motif-containing protein | - |
| QN340_RS03855 (QN340_03855) | - | 783263..784354 (+) | 1092 | WP_020449837.1 | protein arginine kinase | - |
| QN340_RS03860 (QN340_03860) | clpC | 784351..786783 (+) | 2433 | WP_020449838.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| QN340_RS03865 (QN340_03865) | radA | 786863..788242 (+) | 1380 | WP_020449839.1 | DNA repair protein RadA | Machinery gene |
| QN340_RS03870 (QN340_03870) | disA | 788246..789322 (+) | 1077 | WP_020449840.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| QN340_RS03875 (QN340_03875) | - | 789454..790542 (+) | 1089 | WP_009330350.1 | PIN/TRAM domain-containing protein | - |
| QN340_RS03880 (QN340_03880) | ispD | 790559..791254 (+) | 696 | WP_020449841.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| QN340_RS03885 (QN340_03885) | ispF | 791247..791723 (+) | 477 | WP_020449842.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90177.76 Da Isoelectric Point: 5.9547
>NTDB_id=838131 QN340_RS03860 WP_020449838.1 784351..786783(+) (clpC) [Bacillus paralicheniformis strain DY4]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSEQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIEKGQHIVLDVEGGE
FVVKTEAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLSPDKIQKEVESLIGRGQEMSQSIHY
TPRAKKVTELAMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGGAASGANSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSPEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEETKKTWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELRRNKYVGFNVQDETQNYKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLK
DIVSLMSEQLTKRLKEQDLSIELTEAAKEKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGHIEKGQHIVLDVEGGE
FVVKTEAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=838131 QN340_RS03860 WP_020449838.1 784351..786783(+) (clpC) [Bacillus paralicheniformis strain DY4]
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTGGGCCATAA
TAACATTGGAACAGAACATATTCTCCTCGGCCTTGTCCGCGAGGGAGAAGGGATTGCTGCAAAGGCGCTGCAGGCATTGG
GACTCAGCCCTGACAAGATTCAAAAAGAAGTTGAAAGCCTCATTGGCCGAGGGCAAGAGATGTCACAATCGATCCATTAC
ACACCGAGAGCCAAAAAAGTGACTGAACTGGCGATGGATGAAGCAAGAAAGCTTGGTCACTCCTACGTTGGAACTGAACA
CATCCTCCTCGGCTTAATCCGAGAAGGGGAAGGTGTTGCGGCAAGGGTGCTGAATAATTTAGGCGTCAGCTTAAACAAAG
CGAGACAGCAAGTATTGCAGCTGTTGGGCAGCAATGAGAGCGGTGGCGCTGCTTCAGGCGCCAACAGCAATGCCAACACA
CCAACCTTAGACAGTCTTGCCAGGGATCTCACGGCGATTGCAAAAGAAGACAGCCTTGACCCCGTAATCGGCAGAAGCAA
AGAAATTCAGCGCGTAATTGAAGTGCTGAGCCGCAGAACGAAAAACAACCCTGTGTTAATCGGGGAGCCCGGTGTCGGTA
AGACAGCGATTGCCGAAGGCCTCGCCCAGCAGATCATCAATAACGAAGTACCGGAGATTCTCCGCGATAAGCGAGTTATG
ACGCTTGATATGGGAACGGTTGTCGCCGGTACGAAATACCGCGGTGAATTTGAAGACCGCCTGAAAAAAGTGATGGACGA
AATTCGTCAAGCGGGAAATATCATCCTCTTTATCGATGAGCTGCATACTCTCATCGGAGCCGGGGGAGCGGAAGGGGCCA
TCGATGCCTCCAATATCCTTAAACCGTCTTTGGCGCGCGGAGAGCTGCAATGTATCGGAGCGACAACCCTTGATGAATAC
CGCAAATACATTGAAAAAGATGCTGCACTCGAACGGCGTTTTCAGCCGATTCAGGTTGACCAGCCGTCTCCTGAAGAGAG
CATTCAAATATTGAGAGGTCTCAGAGACCGCTATGAAGCCCACCACCGCGTATCGATTACGGATGAAGCGATTGAAGCGG
CTGTGAAGCTGTCAGACCGGTATATTTCGGACCGTTTTCTGCCTGACAAGGCGATCGACTTAATCGATGAAGCCGGTTCA
AAGGTTCGCCTGCGTTCATTTACAACGCCTCCGAACTTAAAAGAGCTTGAACAAAAGCTTGATGAAGTAAGGAAAGAAAA
AGATGCCGCTGTCCAAAGCCAGGAATTCGAAAAAGCAGCGTCATTACGGGATACGGAGCAGCGCCTGCGCGAACAGGTCG
AAGAAACCAAGAAAACCTGGAAAGAAAAGCAGGGACAGGAAAATTCAGAAGTGACCGTCGACGATATTGCAATGGTTGTT
TCAAGCTGGACCGGAGTGCCGGTTTCGAAAATTGCGCAGACTGAAACAGACAAATTACTGAACATGGAGAGCATTCTTCA
TTCCCGCGTTATCGGCCAAGATGAGGCTGTCGTTGCGGTTGCCAAAGCAGTCAGACGCGCGCGTGCCGGCTTAAAAGATC
CAAAACGTCCTATCGGTTCTTTTATTTTCCTCGGCCCTACAGGCGTAGGAAAAACGGAGCTTGCCCGTGCACTTGCCGAG
TCCATTTTCGGCGATGAAGAAGCCATGATTCGCATCGATATGTCCGAGTATATGGAAAAACATTCAACATCAAGACTCGT
CGGTTCCCCTCCGGGATATGTCGGCTATGATGAAGGCGGACAGCTCACTGAAAAAGTGAGAAGAAAACCGTATTCCGTCG
TCTTGCTTGACGAAATCGAAAAAGCGCACCCTGATGTCTTCAATATTTTGCTGCAAGTGCTTGAAGACGGTCGCCTGACT
GATTCAAAAGGGCGCACGGTCGACTTTAGAAATACGATTTTGATCATGACATCAAACGTCGGTGCGAGCGAACTGAGAAG
AAATAAATACGTCGGGTTTAATGTGCAGGATGAAACCCAGAATTATAAAGATATGAAAGACAAAGTCATGGGCGAATTAA
AACGCGCCTTCAGACCTGAATTTATCAACCGGATTGATGAGATTATCGTCTTCCACTCTTTGGAGAAAAAACATTTGAAA
GATATTGTATCCCTCATGTCAGAACAATTAACTAAGCGTCTGAAAGAACAGGATCTGTCAATTGAGCTGACTGAAGCGGC
TAAAGAAAAAATTGCCGATGAAGGCGTGGATCTCGAATACGGGGCGCGCCCTCTCAGAAGAGCAATCCAAAAACACGTGG
AGGACCGGCTGTCTGAAGAGCTCCTGAAAGGCCATATTGAAAAAGGCCAGCATATTGTTTTGGATGTAGAAGGCGGAGAA
TTTGTCGTAAAAACCGAAGCTAAAACGAACTAA
ATGATGTTTGGAAGATTCACAGAAAGAGCACAAAAAGTATTGGCGCTTGCTCAAGAAGAAGCTCTGCGTCTGGGCCATAA
TAACATTGGAACAGAACATATTCTCCTCGGCCTTGTCCGCGAGGGAGAAGGGATTGCTGCAAAGGCGCTGCAGGCATTGG
GACTCAGCCCTGACAAGATTCAAAAAGAAGTTGAAAGCCTCATTGGCCGAGGGCAAGAGATGTCACAATCGATCCATTAC
ACACCGAGAGCCAAAAAAGTGACTGAACTGGCGATGGATGAAGCAAGAAAGCTTGGTCACTCCTACGTTGGAACTGAACA
CATCCTCCTCGGCTTAATCCGAGAAGGGGAAGGTGTTGCGGCAAGGGTGCTGAATAATTTAGGCGTCAGCTTAAACAAAG
CGAGACAGCAAGTATTGCAGCTGTTGGGCAGCAATGAGAGCGGTGGCGCTGCTTCAGGCGCCAACAGCAATGCCAACACA
CCAACCTTAGACAGTCTTGCCAGGGATCTCACGGCGATTGCAAAAGAAGACAGCCTTGACCCCGTAATCGGCAGAAGCAA
AGAAATTCAGCGCGTAATTGAAGTGCTGAGCCGCAGAACGAAAAACAACCCTGTGTTAATCGGGGAGCCCGGTGTCGGTA
AGACAGCGATTGCCGAAGGCCTCGCCCAGCAGATCATCAATAACGAAGTACCGGAGATTCTCCGCGATAAGCGAGTTATG
ACGCTTGATATGGGAACGGTTGTCGCCGGTACGAAATACCGCGGTGAATTTGAAGACCGCCTGAAAAAAGTGATGGACGA
AATTCGTCAAGCGGGAAATATCATCCTCTTTATCGATGAGCTGCATACTCTCATCGGAGCCGGGGGAGCGGAAGGGGCCA
TCGATGCCTCCAATATCCTTAAACCGTCTTTGGCGCGCGGAGAGCTGCAATGTATCGGAGCGACAACCCTTGATGAATAC
CGCAAATACATTGAAAAAGATGCTGCACTCGAACGGCGTTTTCAGCCGATTCAGGTTGACCAGCCGTCTCCTGAAGAGAG
CATTCAAATATTGAGAGGTCTCAGAGACCGCTATGAAGCCCACCACCGCGTATCGATTACGGATGAAGCGATTGAAGCGG
CTGTGAAGCTGTCAGACCGGTATATTTCGGACCGTTTTCTGCCTGACAAGGCGATCGACTTAATCGATGAAGCCGGTTCA
AAGGTTCGCCTGCGTTCATTTACAACGCCTCCGAACTTAAAAGAGCTTGAACAAAAGCTTGATGAAGTAAGGAAAGAAAA
AGATGCCGCTGTCCAAAGCCAGGAATTCGAAAAAGCAGCGTCATTACGGGATACGGAGCAGCGCCTGCGCGAACAGGTCG
AAGAAACCAAGAAAACCTGGAAAGAAAAGCAGGGACAGGAAAATTCAGAAGTGACCGTCGACGATATTGCAATGGTTGTT
TCAAGCTGGACCGGAGTGCCGGTTTCGAAAATTGCGCAGACTGAAACAGACAAATTACTGAACATGGAGAGCATTCTTCA
TTCCCGCGTTATCGGCCAAGATGAGGCTGTCGTTGCGGTTGCCAAAGCAGTCAGACGCGCGCGTGCCGGCTTAAAAGATC
CAAAACGTCCTATCGGTTCTTTTATTTTCCTCGGCCCTACAGGCGTAGGAAAAACGGAGCTTGCCCGTGCACTTGCCGAG
TCCATTTTCGGCGATGAAGAAGCCATGATTCGCATCGATATGTCCGAGTATATGGAAAAACATTCAACATCAAGACTCGT
CGGTTCCCCTCCGGGATATGTCGGCTATGATGAAGGCGGACAGCTCACTGAAAAAGTGAGAAGAAAACCGTATTCCGTCG
TCTTGCTTGACGAAATCGAAAAAGCGCACCCTGATGTCTTCAATATTTTGCTGCAAGTGCTTGAAGACGGTCGCCTGACT
GATTCAAAAGGGCGCACGGTCGACTTTAGAAATACGATTTTGATCATGACATCAAACGTCGGTGCGAGCGAACTGAGAAG
AAATAAATACGTCGGGTTTAATGTGCAGGATGAAACCCAGAATTATAAAGATATGAAAGACAAAGTCATGGGCGAATTAA
AACGCGCCTTCAGACCTGAATTTATCAACCGGATTGATGAGATTATCGTCTTCCACTCTTTGGAGAAAAAACATTTGAAA
GATATTGTATCCCTCATGTCAGAACAATTAACTAAGCGTCTGAAAGAACAGGATCTGTCAATTGAGCTGACTGAAGCGGC
TAAAGAAAAAATTGCCGATGAAGGCGTGGATCTCGAATACGGGGCGCGCCCTCTCAGAAGAGCAATCCAAAAACACGTGG
AGGACCGGCTGTCTGAAGAGCTCCTGAAAGGCCATATTGAAAAAGGCCAGCATATTGTTTTGGATGTAGAAGGCGGAGAA
TTTGTCGTAAAAACCGAAGCTAAAACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
95.926 |
100 |
0.959 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.375 |
98.765 |
0.498 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.973 |
100 |
0.479 |
| clpC | Streptococcus thermophilus LMD-9 |
46.852 |
100 |
0.478 |
| clpC | Streptococcus pneumoniae Rx1 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
45.488 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus mutans UA159 |
43.728 |
100 |
0.452 |
| clpE | Streptococcus mutans UA159 |
53.313 |
80.123 |
0.427 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.324 |
88.395 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.582 |
78.889 |
0.415 |
| clpE | Streptococcus pneumoniae Rx1 |
52.582 |
78.889 |
0.415 |
| clpE | Streptococcus pneumoniae D39 |
52.582 |
78.889 |
0.415 |
| clpE | Streptococcus pneumoniae R6 |
52.582 |
78.889 |
0.415 |