Detailed information NTG0838120

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QN340_RS00410
• Genome accession: NZ_CP126496
• Coordinates: 73608..74765 (-)
• Length: 385 a.a.
• NCBI ID: WP_020453119.1
• Uniprot ID: A0A6I7TVP7
• Organism: Bacillus paralicheniformis strain DY4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 68608..79765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN340_RS00380 (QN340_00380)	-	68846..69265 (-)	420	WP_020453114.1	TIGR03826 family flagellar region protein	-
QN340_RS00385 (QN340_00385)	comFC	69324..70061 (-)	738	WP_026580174.1	ComF family protein	Machinery gene
QN340_RS00390 (QN340_00390)	-	70018..70302 (-)	285	WP_020453116.1	late competence development ComFB family protein	-
QN340_RS00395 (QN340_00395)	comFA	70357..71751 (-)	1395	WP_020453117.1	DEAD/DEAH box helicase	Machinery gene
QN340_RS00400 (QN340_00400)	-	71875..72717 (-)	843	WP_020453118.1	DegV family protein	-
QN340_RS00405 (QN340_00405)	degU	72837..73526 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
QN340_RS00410 (QN340_00410)	degS	73608..74765 (-)	1158	WP_020453119.1	histidine kinase	Regulator
QN340_RS00415 (QN340_00415)	-	74988..75626 (+)	639	WP_020453120.1	YigZ family protein	-
QN340_RS00420 (QN340_00420)	-	75641..76720 (+)	1080	WP_020453121.1	LCP family protein	-
QN340_RS00425 (QN340_00425)	-	76773..77156 (-)	384	WP_020453122.1	hypothetical protein	-
QN340_RS00430 (QN340_00430)	-	77265..78329 (-)	1065	WP_020453123.1	MraY family glycosyltransferase	-
QN340_RS00435 (QN340_00435)	-	78460..79647 (-)	1188	WP_228119611.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44650.34 Da
• Isoelectric Point: 6.7862

>NTDB_id=838120 QN340_RS00410 WP_020453119.1 73608..74765(-) (degS) [Bacillus paralicheniformis strain DY4]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEDRRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=838120 QN340_RS00410 WP_020453119.1 73608..74765(-) (degS) [Bacillus paralicheniformis strain DY4]
GTGAGTGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGATGGGAGCAAGGA
TGAGGTCTTTCAAATCGGAGAGCAGTCCCGTCAGCAATATGAAGGCTTGGTAGAAGAGCTGAAGCAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGAAACCGCTTGTCTGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGCCAGATTACCGTCGTCTTAAACTATTTAAATCAGGATCTGCGCCAGGTTGGCGTTCTCCTA
GAAGATGCGCAGGCCAAACAGGATTTCGGACTGCGGATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATCCACGACGGCCCTGCGCAAATGCTGGCCAACGTCATGATGAGATCTGAGCTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAGAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATCCATTTCCAATGCATCGGAGAATCCGAAGATAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TTTTCCGGCTTGCACAGGAAGCAGTGACAAACGCCTTAAAACACTCCGAATCAACTGAGATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGTTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTTAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGTTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATTTTGATTAAAGTTCCGCTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A6I7TVP7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894