Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   QOM09_RS06215 Genome accession   NZ_CP126474
Coordinates   1186529..1187212 (+) Length   227 a.a.
NCBI ID   WP_000350716.1    Uniprot ID   A0A9W5VN71
Organism   Bacillus thuringiensis strain DHC4     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1181529..1192212
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QOM09_RS06195 (QOM09_06195) - 1182590..1184236 (+) 1647 WP_000727250.1 peptide ABC transporter substrate-binding protein -
  QOM09_RS06200 (QOM09_06200) - 1184267..1184470 (-) 204 WP_000559971.1 hypothetical protein -
  QOM09_RS06205 (QOM09_06205) spx 1185064..1185459 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  QOM09_RS06210 (QOM09_06210) - 1185509..1186183 (-) 675 WP_000362615.1 TerC family protein -
  QOM09_RS06215 (QOM09_06215) mecA 1186529..1187212 (+) 684 WP_000350716.1 adaptor protein MecA Regulator
  QOM09_RS06220 (QOM09_06220) - 1187285..1188829 (+) 1545 WP_000799198.1 cardiolipin synthase -
  QOM09_RS06225 (QOM09_06225) - 1188910..1190154 (+) 1245 WP_048568764.1 competence protein CoiA family protein -
  QOM09_RS06230 (QOM09_06230) pepF 1190206..1192032 (+) 1827 WP_053513450.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 27009.07 Da        Isoelectric Point: 3.9986

>NTDB_id=838075 QOM09_RS06215 WP_000350716.1 1186529..1187212(+) (mecA) [Bacillus thuringiensis strain DHC4]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=838075 QOM09_RS06215 WP_000350716.1 1186529..1187212(+) (mecA) [Bacillus thuringiensis strain DHC4]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564