Detailed information NTG0838059

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: VB057_RS00870
• Genome accession: NZ_CP141791
• Coordinates: 183676..184659 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain BHD6
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 178676..189659

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VB057_RS00850 (VB057_00850)	dppA	179819..181426 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
VB057_RS00860 (VB057_00860)	dppB	181734..182753 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
VB057_RS00865 (VB057_00865)	dppC	182763..183665 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
VB057_RS00870 (VB057_00870)	amiE	183676..184659 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
VB057_RS00875 (VB057_00875)	dppF	184656..185660 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
VB057_RS00880 (VB057_00880)	yhjV	185690..186961 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
VB057_RS00885 (VB057_00885)	ldrD	187437..187544 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
VB057_RS00890 (VB057_00890)	bcsG	187631..189310 (-)	1680	WP_000191596.1	cellulose biosynthesis protein BcsG	-
VB057_RS00895 (VB057_00895)	bcsF	189307..189498 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=838059 VB057_RS00870 WP_001196486.1 183676..184659(+) (amiE) [Escherichia coli strain BHD6]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=838059 VB057_RS00870 WP_001196486.1 183676..184659(+) (amiE) [Escherichia coli strain BHD6]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404