Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   QLQ03_RS15900 Genome accession   NZ_CP126456
Coordinates   3079580..3080161 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain KRS010     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3074580..3085161
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ03_RS15875 - 3075247..3076425 (+) 1179 WP_242731931.1 N-acetyldiaminopimelate deacetylase -
  QLQ03_RS15880 - 3076476..3076718 (+) 243 WP_024424725.1 YkuS family protein -
  QLQ03_RS15885 - 3076741..3077550 (-) 810 WP_242731933.1 mechanosensitive ion channel family protein -
  QLQ03_RS15890 ahpA 3077822..3078364 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  QLQ03_RS15895 - 3078641..3079099 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  QLQ03_RS15900 rok 3079580..3080161 (+) 582 WP_007498648.1 hypothetical protein Regulator
  QLQ03_RS15905 - 3080224..3081141 (-) 918 WP_079920060.1 sigmaE regulated sporulation protein -
  QLQ03_RS15910 - 3081224..3081805 (+) 582 WP_284565335.1 molybdenum cofactor guanylyltransferase -
  QLQ03_RS15915 - 3081835..3082851 (+) 1017 WP_284565063.1 MoeB/ThiF family adenylyltransferase -
  QLQ03_RS15920 glp 3082861..3084135 (+) 1275 WP_284565064.1 gephyrin-like molybdotransferase Glp -
  QLQ03_RS15925 mobB 3084117..3084644 (+) 528 WP_007498638.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  QLQ03_RS15930 - 3084637..3085128 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=837926 QLQ03_RS15900 WP_007498648.1 3079580..3080161(+) (rok) [Bacillus altitudinis strain KRS010]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=837926 QLQ03_RS15900 WP_007498648.1 3079580..3080161(+) (rok) [Bacillus altitudinis strain KRS010]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTACGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782