Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QLQ03_RS13955 Genome accession   NZ_CP126456
Coordinates   2725334..2726284 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain KRS010     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2720334..2731284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ03_RS13935 - 2721570..2722052 (+) 483 WP_046343108.1 hypothetical protein -
  QLQ03_RS13940 - 2722083..2723522 (-) 1440 WP_171465157.1 PLP-dependent aminotransferase family protein -
  QLQ03_RS13945 - 2723666..2724835 (+) 1170 WP_048001723.1 MFS transporter -
  QLQ03_RS13950 - 2724898..2725176 (+) 279 WP_019743339.1 barstar family protein -
  QLQ03_RS13955 ceuB 2725334..2726284 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  QLQ03_RS13960 - 2726277..2727227 (+) 951 WP_025207102.1 iron chelate uptake ABC transporter family permease subunit -
  QLQ03_RS13965 - 2727218..2727976 (+) 759 WP_081114757.1 ATP-binding cassette domain-containing protein -
  QLQ03_RS13970 - 2727999..2728943 (+) 945 WP_284564979.1 siderophore ABC transporter substrate-binding protein -
  QLQ03_RS13975 - 2729083..2730039 (+) 957 WP_007499147.1 LCP family protein -
  QLQ03_RS13980 - 2730272..2730706 (-) 435 WP_072367597.1 enoyl-CoA hydratase -
  QLQ03_RS13985 - 2730792..2731154 (-) 363 WP_144684700.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=837913 QLQ03_RS13955 WP_017366964.1 2725334..2726284(+) (ceuB) [Bacillus altitudinis strain KRS010]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=837913 QLQ03_RS13955 WP_017366964.1 2725334..2726284(+) (ceuB) [Bacillus altitudinis strain KRS010]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTCAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTACAAGGGGATTTTTCTCTTATTGTTCAGGGACGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTTGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTACTCGGACGGGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494