Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   QLQ03_RS10710 Genome accession   NZ_CP126456
Coordinates   2056135..2056563 (-) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus altitudinis strain KRS010     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2051135..2061563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ03_RS10680 - 2051279..2051608 (+) 330 WP_007498247.1 YckD family protein -
  QLQ03_RS10685 - 2051655..2052419 (-) 765 WP_060780746.1 MBL fold metallo-hydrolase -
  QLQ03_RS10690 - 2052535..2052954 (+) 420 WP_008347846.1 Lrp/AsnC family transcriptional regulator -
  QLQ03_RS10695 - 2052979..2053785 (+) 807 WP_025206721.1 AAC(3) family N-acetyltransferase -
  QLQ03_RS10700 comJ 2053787..2054173 (-) 387 WP_081114847.1 competence protein ComJ -
  QLQ03_RS10705 - 2054311..2056008 (-) 1698 WP_242731524.1 methyl-accepting chemotaxis protein -
  QLQ03_RS10710 nucA/comI 2056135..2056563 (-) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  QLQ03_RS10715 - 2056930..2058999 (+) 2070 WP_284564870.1 hydantoinase/oxoprolinase family protein -
  QLQ03_RS10720 - 2058989..2060974 (+) 1986 WP_035703172.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=837906 QLQ03_RS10710 WP_007498233.1 2056135..2056563(-) (nucA/comI) [Bacillus altitudinis strain KRS010]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=837906 QLQ03_RS10710 WP_007498233.1 2056135..2056563(-) (nucA/comI) [Bacillus altitudinis strain KRS010]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCGACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGATATCCAGAAACCGCGAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGAAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514