Detailed information NTG0837870

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: VA243_RS02510
• Genome accession: NZ_CP141774
• Coordinates: 506244..509069 (-)
• Length: 941 a.a.
• NCBI ID: WP_324714954.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain P07353
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 501244..514069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VA243_RS02490	-	501454..501840 (+)	387	WP_001279200.1	diacylglycerol kinase	-
VA243_RS02495	gyrA	501860..504346 (+)	2487	WP_324714952.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
VA243_RS02500	-	504346..504819 (+)	474	WP_001867995.1	hypothetical protein	-
VA243_RS02505	flgR	504816..505961 (+)	1146	WP_324714953.1	transcriptional activator FlgR	-
VA243_RS02510	uvrA	506244..509069 (-)	2826	WP_324714954.1	excinuclease ABC subunit UvrA	Machinery gene
VA243_RS02515	hopE	509244..510065 (+)	822	WP_000395385.1	Hop family outer membrane protein HopE	-
VA243_RS02520	rsmH	510243..511169 (+)	927	WP_324714955.1	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	-
VA243_RS02525	-	511189..511533 (+)	345	WP_001028000.1	hypothetical protein	-
VA243_RS02530	-	511779..512681 (+)	903	WP_324714956.1	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	-
VA243_RS02535	-	512746..512943 (+)	198	Protein_497	hypothetical protein	-

Sequence

Protein

• Length: 941 a.a.
• Molecular weight: 104778.67 Da
• Isoelectric Point: 7.7364

>NTDB_id=837870 VA243_RS02510 WP_324714954.1 506244..509069(-) (uvrA) [Helicobacter pylori strain P07353]
MQHKTIMDKIIIQGARENNLKNIFLEIPKNQFVVFTGLSGSGKSTLAFDTLYAEGQRRYLESLSSYARQFLDKVGKPNVD
KIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLFARIGEQFCPTCLEPISSMSASDIISQICHLEENSKIIILAPI
IKDKKGSFNDKLESLRLKGYVRAFVDGVMVRLDEEIHLHKTKKHTIEAVVDRVVINSENSSRIASAVEKALKESYGELEV
EILQDNAPSIRKHYSEHKACFKCKMSFEELEPLSFSFNSPKGACESCLGLGTKFSLDISKILDPNTPLNQGAIKVIFGYN
RSYYAQMFEGFCEYNGIDTALCFNELNKEQQDALLYGNGTEISFHFKNSPLKRPWKGIIQIAYDMFKEQKDLSDYMSEKT
CSSCEGHRLKASSLSVQVAGLKMADFLTKPIEEVYHFFNDPTHFSYLNEQEKKIAEPILKEILERVFFLYDVGLGYLTLG
RDARTISGGESQRIRIASQIGSGLTGVLYVLDEPSIGLHEKDTLKLINTLRNLQKKGNTLIVVEHDKETIKHADFVVDIG
PKAGRHGGEVVFSGSVKDLLQNNHSTALYLNGTKKIERPKFEPPKEKHFLEIKNVNINNIKNLSVQIPLKQLVCITGVSG
SGKSSLILQTLLPTAQTLLNHAKKIQSLNGVEIVGLEHLDKVIYLDQAPIGKTPRSNPATYTGVMDEIRILFAEQKEAKI
LGYSASRFSFNVKGGRCEKCQGDGDIKIEMHFLPDVLVQCDSCKGAKYNPQTLEIKVKGKSIADVLNMSVEEAYEFFAKF
PKIAVKLKTLIDVGLGYITLGQNATTLSGGEAQRIKLAKELSKKDTGKTLYILDEPTTGLHFEDVNHLLQVLHSLVVLGN
SMLVIEHNLDIIKNADYIIDMGPDGGDKGGKVIASGTPLEVAKNCEKTQSYTGKFLALELK

Nucleotide

• Length: 2826 bp

>NTDB_id=837870 VA243_RS02510 WP_324714954.1 506244..509069(-) (uvrA) [Helicobacter pylori strain P07353]
TTGCAACATAAAACCATTATGGATAAGATCATTATTCAAGGGGCTAGGGAAAATAATCTCAAAAATATTTTTTTAGAAAT
CCCTAAAAACCAATTTGTTGTTTTTACCGGATTAAGCGGTTCGGGTAAATCCACTCTGGCGTTTGACACTTTATACGCTG
AAGGCCAAAGGCGCTATTTAGAGAGTTTGTCCAGCTATGCGAGGCAATTTTTAGACAAAGTGGGTAAGCCTAATGTGGAT
AAAATTGAAGGCCTAACCCCTGCGATTGCTATTGATCAAAAAACCACTTCTAAAAACCCTAGATCCACTGTGGGGACGAT
CACTGAGATTTATGATTATTTAAGGTTGTTGTTTGCAAGGATTGGGGAGCAATTTTGCCCCACATGTTTAGAGCCCATTA
GTTCTATGAGTGCGAGCGATATTATTTCTCAAATCTGTCATTTAGAAGAAAATTCTAAAATCATTATTCTAGCCCCCATT
ATTAAAGATAAAAAAGGTTCGTTTAACGATAAATTAGAGAGCTTGCGTTTAAAGGGGTATGTGAGGGCTTTCGTTGATGG
GGTGATGGTGCGTTTAGATGAAGAAATCCATTTGCACAAAACCAAAAAACACACCATTGAAGCGGTGGTGGATAGGGTGG
TTATCAATAGCGAAAATTCTTCACGGATCGCTAGCGCAGTAGAAAAAGCCCTTAAAGAAAGCTATGGGGAATTAGAAGTG
GAAATCTTGCAAGATAATGCGCCAAGTATTAGGAAGCATTACAGCGAGCATAAGGCATGCTTTAAATGCAAGATGAGTTT
TGAAGAATTAGAGCCTTTGAGTTTTTCCTTCAATTCGCCTAAAGGGGCGTGCGAGAGCTGTTTGGGTTTGGGGACAAAAT
TCAGTTTAGATATTAGTAAGATTTTAGATCCTAACACGCCTTTAAATCAAGGAGCGATTAAAGTGATTTTTGGGTATAAC
CGCAGTTATTACGCTCAAATGTTTGAAGGTTTTTGCGAATATAATGGCATTGACACCGCACTTTGTTTTAACGAATTGAA
TAAAGAGCAACAGGACGCTCTTTTGTATGGGAATGGCACTGAAATCAGCTTTCATTTCAAAAACAGCCCTTTAAAACGCC
CTTGGAAAGGCATTATCCAAATCGCTTATGACATGTTTAAAGAGCAGAAGGATTTGAGCGATTACATGAGCGAAAAAACC
TGTTCTTCGTGCGAGGGGCATCGTTTGAAAGCTTCAAGTTTGAGCGTTCAAGTCGCTGGCTTGAAAATGGCGGATTTTTT
AACTAAGCCCATTGAAGAGGTCTATCACTTTTTTAATGATCCCACGCATTTTAGCTATCTTAACGAGCAAGAAAAAAAGA
TCGCTGAACCCATTTTAAAAGAGATTTTAGAAAGGGTGTTTTTTTTATACGATGTGGGGCTAGGGTATTTGACTTTAGGG
AGGGATGCGCGAACGATTAGCGGAGGGGAGAGCCAAAGGATACGAATCGCTAGTCAAATCGGGAGCGGCTTGACCGGGGT
TTTGTATGTTTTAGACGAGCCTAGCATTGGTTTGCATGAAAAAGACACGCTCAAACTCATCAACACCCTTAGGAATTTGC
AAAAAAAGGGGAACACGCTCATTGTCGTAGAGCATGATAAAGAGACGATTAAGCATGCGGATTTTGTTGTGGATATTGGG
CCAAAGGCTGGAAGGCATGGGGGTGAAGTGGTTTTTAGCGGGAGCGTAAAAGATTTATTGCAAAACAACCATTCTACCGC
CTTGTATCTCAACGGCACTAAAAAGATTGAGCGCCCTAAATTTGAACCCCCTAAAGAAAAGCATTTTTTAGAAATTAAAA
ATGTCAATATCAATAACATTAAGAATTTGAGCGTTCAAATCCCTTTAAAACAATTAGTGTGCATTACTGGGGTGAGCGGG
AGCGGTAAAAGTTCGCTGATTTTACAAACCCTTTTACCCACCGCTCAAACCCTTTTAAACCATGCTAAAAAAATTCAAAG
CTTGAATGGGGTGGAGATTGTAGGGTTGGAGCATTTGGATAAAGTGATTTATTTAGACCAAGCCCCCATAGGCAAAACCC
CACGAAGCAACCCTGCCACTTATACAGGAGTGATGGATGAAATCAGGATTTTATTTGCCGAGCAAAAAGAAGCTAAAATT
TTAGGCTATAGCGCGAGCCGTTTTAGCTTTAATGTTAAAGGGGGGCGGTGCGAGAAATGCCAAGGCGATGGGGATATTAA
AATAGAAATGCACTTTTTGCCTGATGTGTTAGTCCAATGCGATAGCTGTAAGGGTGCTAAATACAACCCCCAAACTTTAG
AAATCAAGGTGAAAGGCAAATCCATTGCCGATGTGTTGAACATGAGCGTGGAAGAGGCTTATGAATTTTTTGCTAAATTC
CCTAAAATCGCCGTGAAGTTAAAAACCCTCATAGATGTGGGCTTAGGCTATATCACTTTAGGGCAAAACGCTACGACTTT
AAGCGGGGGGGAGGCTCAAAGGATCAAATTAGCTAAAGAATTGAGTAAAAAAGACACAGGCAAAACCCTTTATATTTTAG
ATGAGCCTACCACCGGTTTGCATTTTGAAGACGTGAATCACCTTTTACAGGTTTTGCATTCTTTAGTGGTGTTAGGCAAT
TCCATGCTAGTGATTGAGCATAATTTAGACATTATCAAAAACGCTGACTACATTATAGACATGGGGCCTGATGGGGGGGA
TAAGGGCGGGAAAGTCATTGCGAGCGGCACGCCTTTAGAGGTGGCAAAAAATTGCGAAAAAACCCAAAGCTATACGGGAA
AATTTTTAGCTTTGGAATTGAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (137-243)

• ABC transporter (ABC_tran) (621-857)

• UvrA DNA-binding domain (UvrA_DNA-bind) (297-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	49.948	100	0.508
uvrA	Streptococcus pneumoniae TIGR4	49.948	100	0.508
uvrA	Streptococcus pneumoniae D39	49.948	100	0.508