Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   QN095_RS08375 Genome accession   NZ_CP126341
Coordinates   1795739..1796365 (+) Length   208 a.a.
NCBI ID   WP_284557854.1    Uniprot ID   -
Organism   Enterobacter cloacae strain TL15     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1790739..1801365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN095_RS08355 (QN095_08355) - 1791139..1792899 (-) 1761 WP_161669733.1 Lon protease family protein -
  QN095_RS08360 (QN095_08360) matP 1793086..1793538 (+) 453 WP_013097258.1 macrodomain Ter protein MatP -
  QN095_RS08365 (QN095_08365) ompA 1793602..1794657 (-) 1056 WP_014883252.1 porin OmpA -
  QN095_RS08370 (QN095_08370) sulA 1795012..1795521 (-) 510 WP_013097256.1 SOS-induced cell division inhibitor SulA -
  QN095_RS08375 (QN095_08375) sxy/tfoX 1795739..1796365 (+) 627 WP_284557854.1 TfoX/Sxy family DNA transformation protein Regulator
  QN095_RS08380 (QN095_08380) yccS 1796322..1798484 (-) 2163 WP_045902770.1 YccS family putative transporter -
  QN095_RS08385 (QN095_08385) - 1798504..1798950 (-) 447 WP_013097253.1 YccF domain-containing protein -
  QN095_RS08390 (QN095_08390) helD 1799073..1801127 (+) 2055 WP_102752518.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23972.56 Da        Isoelectric Point: 9.2192

>NTDB_id=837722 QN095_RS08375 WP_284557854.1 1795739..1796365(+) (sxy/tfoX) [Enterobacter cloacae strain TL15]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEESAKYCVKNGSSFLTLMKRGKPILLN
YYRVDDGLWQDRERLLQLSSYALNAARKERIQRYQRNRLKDLPNLTFQLEVLLCEAGITNEDTLRSLGARTSWLKLRAKN
KALSIKVLFALEGAIEGLHEAALPAEIRRELTEWFNALPEPQENRSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=837722 QN095_RS08375 WP_284557854.1 1795739..1796365(+) (sxy/tfoX) [Enterobacter cloacae strain TL15]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCTCCATTAGGAGAAATTCATCATCGTGCGCT
TTTTGGTGGCTATACCCTGGCCGTCGATGAGGCGGTGTTTGCCATGGTGTCAGACGGTGAGCTTTACCTTCGCGCCTGTG
AGGAAAGTGCGAAGTACTGTGTAAAAAACGGATCCTCCTTTTTGACCTTAATGAAACGCGGTAAGCCGATCCTTCTCAAC
TATTATCGTGTGGATGACGGTCTCTGGCAGGACAGGGAGCGGCTGCTTCAGCTTTCCTCTTACGCGCTTAATGCCGCGCG
TAAAGAGCGCATACAACGCTACCAGCGAAACCGGCTAAAGGATCTGCCCAACCTGACTTTTCAGCTGGAAGTCCTGCTCT
GTGAAGCCGGGATTACCAACGAAGATACCCTCCGGTCGCTGGGAGCCAGAACGAGCTGGCTAAAGCTGCGGGCAAAAAAT
AAAGCACTCAGTATCAAAGTACTGTTTGCCCTGGAAGGGGCGATTGAGGGCCTGCATGAAGCGGCACTCCCGGCGGAAAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCGCTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.635

97.596

0.562