Detailed information NTG0837598

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: U8328_RS00920
• Genome accession: NZ_CP141767
• Coordinates: 206015..206998 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain T-HYM1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 201015..211998

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U8328_RS00905 (U8328_00905)	dppA	202159..203766 (+)	1608	WP_001222875.1	dipeptide ABC transporter substrate-binding protein DppA	-
U8328_RS00910 (U8328_00910)	dppB	204073..205092 (+)	1020	WP_000938853.1	dipeptide ABC transporter permease DppB	-
U8328_RS00915 (U8328_00915)	dppC	205102..206004 (+)	903	WP_000084667.1	dipeptide ABC transporter permease DppC	-
U8328_RS00920 (U8328_00920)	amiE	206015..206998 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
U8328_RS00925 (U8328_00925)	dppF	206995..207999 (+)	1005	WP_187195207.1	dipeptide ABC transporter ATP-binding subunit DppF	-
U8328_RS00930 (U8328_00930)	yhjV	208029..209300 (-)	1272	WP_001313380.1	aromatic amino acid transport family protein	-
U8328_RS00935 (U8328_00935)	-	209776..209883 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
U8328_RS00940 (U8328_00940)	-	210259..210366 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
U8328_RS00945 (U8328_00945)	-	210742..210849 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
U8328_RS00950 (U8328_00950)	-	211225..211332 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=837598 U8328_RS00920 WP_001196487.1 206015..206998(+) (amiE) [Escherichia coli strain T-HYM1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=837598 U8328_RS00920 WP_001196487.1 206015..206998(+) (amiE) [Escherichia coli strain T-HYM1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCACTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCACTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407