Detailed information NTG0837578

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OH687_RS18505
• Genome accession: NZ_CP126321
• Coordinates: 821885..823045 (+)
• Length: 386 a.a.
• NCBI ID: WP_089465160.1
• Uniprot ID: -
• Organism: Burkholderia anthina strain SO82
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 816885..828045

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH687_RS18475 (OH687_04270)	-	817527..818132 (+)	606	WP_059575641.1	50S ribosomal protein L25/general stress protein Ctc	-
OH687_RS18480 (OH687_04275)	pth	818251..818850 (+)	600	WP_059642632.1	aminoacyl-tRNA hydrolase	-
OH687_RS18485 (OH687_04280)	hisC	818969..820036 (+)	1068	WP_316376309.1	histidinol-phosphate transaminase	-
OH687_RS18490 (OH687_04285)	-	820117..820383 (-)	267	WP_006477774.1	YfhL family 4Fe-4S dicluster ferredoxin	-
OH687_RS18495 (OH687_04290)	coaD	820443..820940 (-)	498	WP_014895999.1	pantetheine-phosphate adenylyltransferase	-
OH687_RS18500 (OH687_04295)	rsmD	821052..821666 (-)	615	WP_124862546.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OH687_RS18505 (OH687_04300)	pilA	821885..823045 (+)	1161	WP_089465160.1	signal recognition particle-docking protein FtsY	Machinery gene
OH687_RS18510 (OH687_04305)	maiA	823105..823749 (-)	645	WP_060966636.1	maleylacetoacetate isomerase	-
OH687_RS18515 (OH687_04310)	ybiB	823931..824902 (+)	972	WP_089465161.1	DNA-binding protein YbiB	-
OH687_RS18520 (OH687_04320)	leuA	825282..826928 (+)	1647	WP_316376311.1	2-isopropylmalate synthase	-
OH687_RS18525 (OH687_04325)	-	827084..827467 (-)	384	WP_059642650.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 40982.77 Da
• Isoelectric Point: 4.6863

>NTDB_id=837578 OH687_RS18505 WP_089465160.1 821885..823045(+) (pilA) [Burkholderia anthina strain SO82]
MFSFFKRFKKTQEPDPAESQSADAQQADEASDADAPALDAPPAAELPQASAQPAAPAVVMTVTPTNDGRDEVVETVEIVP
PPQQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRAGRLTDPQQV
KDALHDLLVELLAPLEKSLMLGHAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNAL
TQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1161 bp

>NTDB_id=837578 OH687_RS18505 WP_089465160.1 821885..823045(+) (pilA) [Burkholderia anthina strain SO82]
ATGTTCAGTTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAAGCGTCCGACGCCGACGCGCCCGCGCTCGACGCGCCACCCGCGGCCGAGCTGCCGCAGGCGAGCGCCCAACCGG
CCGCGCCGGCCGTCGTGATGACGGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTGGAGACGGTCGAGATCGTCCCG
CCGCCGCAGCAGGACGCCTCCGCGAAGAAGTCGTGGCTCGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTCGAGCAT
CACCGGCGTCTTCGTCAACACGAAGATCGACGAAGACCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGG
GCGTCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCGGGCCGGCTGACCGATCCGCAGCAGGTG
AAGGATGCGCTGCACGACCTGCTCGTCGAGCTGCTGGCGCCGCTCGAGAAATCGCTGATGCTCGGCCACGCGCAGCCGCT
CGTGATGATGATCGCCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCG
ACCAGTCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAAC
AACGTGACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAA
GATCGACGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGAAGC
GCGTGATCGCGAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTGGTGATCGACGCGAACACGGGCCAGAACGCGCTC
ACGCAGGTGAAGGCGTTCGACGACGCGCTGGGCCTGACCGGCCTGATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGG
GATTCTCGCCGCGATCGCGCGGCAACGGCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGC
CGTTCAGCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (187-386)

• SRP54-type protein, helical bundle domain (SRP54_N) (104-166)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.087	100	0.583