Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   QMM94_RS03070 Genome accession   NZ_AP027134
Coordinates   655021..655695 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain JP008     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 650021..660695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QMM94_RS03045 (JP008_05770) - 650236..651303 (+) 1068 WP_000980142.1 membrane protein -
  QMM94_RS03050 (JP008_05780) - 651454..652497 (+) 1044 WP_154283738.1 alpha/beta hydrolase -
  QMM94_RS03055 (JP008_05790) - 652826..653254 (+) 429 WP_000198495.1 hypothetical protein -
  QMM94_RS03060 (JP008_05800) - 653463..653969 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  QMM94_RS03065 (JP008_05810) graX 654082..655005 (+) 924 WP_154283739.1 auxiliary protein GraX/ApsX -
  QMM94_RS03070 (JP008_05820) braR 655021..655695 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  QMM94_RS03075 (JP008_05830) graS 655688..656728 (+) 1041 WP_154283740.1 histidine kinase GraS/ApsS -
  QMM94_RS03080 (JP008_05840) vraF 656875..657636 (+) 762 WP_209205765.1 ABC transporter ATP-binding protein VraF -
  QMM94_RS03085 (JP008_05850) - 657626..659515 (+) 1890 WP_281961989.1 ABC transporter permease -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=83756 QMM94_RS03070 WP_001166505.1 655021..655695(+) (braR) [Staphylococcus aureus strain JP008]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=83756 QMM94_RS03070 WP_001166505.1 655021..655695(+) (braR) [Staphylococcus aureus strain JP008]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTCTTATCATCTCGT
GACAACCCGATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGACAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCTAAAACAGAAATGATTATTTTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402