Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | VA249_RS18930 | Genome accession | NZ_AP024166 |
| Coordinates | 995913..997010 (-) | Length | 365 a.a. |
| NCBI ID | WP_221070306.1 | Uniprot ID | - |
| Organism | Vibrio alfacsensis strain 04Ya108 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 990913..1002010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VA249_RS24275 (VYA_35720) | - | 991263..991493 (+) | 231 | WP_322805179.1 | hypothetical protein | - |
| VA249_RS18915 (VYA_35730) | - | 991673..992125 (-) | 453 | WP_221070299.1 | Lrp/AsnC family transcriptional regulator | - |
| VA249_RS18920 (VYA_35740) | - | 992276..993202 (+) | 927 | WP_221070301.1 | DMT family transporter | - |
| VA249_RS18925 (VYA_35750) | luxQ | 993337..995913 (-) | 2577 | WP_221070303.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| VA249_RS18930 (VYA_35760) | luxP | 995913..997010 (-) | 1098 | WP_221070306.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| VA249_RS18935 (VYA_35770) | - | 997287..997598 (-) | 312 | WP_221070308.1 | GIY-YIG nuclease family protein | - |
| VA249_RS18940 (VYA_35780) | - | 997595..998248 (-) | 654 | WP_128813131.1 | YceH family protein | - |
| VA249_RS18945 (VYA_35790) | - | 998342..998545 (-) | 204 | WP_223917805.1 | hypothetical protein | - |
| VA249_RS18950 (VYA_35800) | - | 998786..999100 (+) | 315 | WP_005442423.1 | DUF496 family protein | - |
| VA249_RS18955 (VYA_35810) | - | 999224..1000558 (+) | 1335 | WP_221070310.1 | MATE family efflux transporter | - |
| VA249_RS18960 (VYA_35820) | - | 1000755..1001747 (-) | 993 | WP_221070312.1 | Gfo/Idh/MocA family protein | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41579.79 Da Isoelectric Point: 5.7737
>NTDB_id=83753 VA249_RS18930 WP_221070306.1 995913..997010(-) (luxP) [Vibrio alfacsensis strain 04Ya108]
MRKSLLLSLMSIAGFSPVAQATQVLNGYWAYQDFLEQFPEQKQLTEQLSKAVRDRPTPLSVSQKRPLRISVVYPGQQVSD
YWVRNIDAFEQRLDKLNINYQINQVFTRPNSDVKQQSLSLMEALKNKTDYLVFTLDTTRHRKFIEHVLDSSKTKLILQNI
TTPVRDWDEHQPFLYVGFDHAEGSRKLAEEFGKRFPRHSNYSVLYFSEGYISDIRGDTFIEQVTRNNQFELQSAYYTKAT
KASGYDATKASLSKYPDVEFIYACSTDVALGAVDALKELGRDDVMINGWGGGSAELKAIENGDLDITVMRMNDDTGIAMA
EAIKWDLEGKSVPTVYSGDFEVVTQSDSAERINALKKRAFRYSDN
MRKSLLLSLMSIAGFSPVAQATQVLNGYWAYQDFLEQFPEQKQLTEQLSKAVRDRPTPLSVSQKRPLRISVVYPGQQVSD
YWVRNIDAFEQRLDKLNINYQINQVFTRPNSDVKQQSLSLMEALKNKTDYLVFTLDTTRHRKFIEHVLDSSKTKLILQNI
TTPVRDWDEHQPFLYVGFDHAEGSRKLAEEFGKRFPRHSNYSVLYFSEGYISDIRGDTFIEQVTRNNQFELQSAYYTKAT
KASGYDATKASLSKYPDVEFIYACSTDVALGAVDALKELGRDDVMINGWGGGSAELKAIENGDLDITVMRMNDDTGIAMA
EAIKWDLEGKSVPTVYSGDFEVVTQSDSAERINALKKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=83753 VA249_RS18930 WP_221070306.1 995913..997010(-) (luxP) [Vibrio alfacsensis strain 04Ya108]
ATGAGAAAATCGTTACTACTTTCCCTGATGTCGATAGCAGGCTTTTCGCCAGTAGCACAAGCCACTCAAGTATTGAATGG
TTACTGGGCCTATCAAGATTTTTTAGAACAATTTCCGGAACAAAAACAGTTAACCGAACAGTTGTCTAAAGCCGTTAGAG
ATCGCCCAACACCGCTATCGGTTTCACAAAAGCGTCCTCTTCGAATTTCAGTCGTTTATCCCGGTCAGCAGGTATCGGAT
TATTGGGTAAGAAATATTGATGCTTTTGAGCAACGTCTCGACAAGCTTAATATTAATTATCAAATCAATCAGGTATTTAC
GCGTCCAAACTCAGATGTTAAGCAACAAAGCTTATCACTAATGGAAGCACTTAAGAATAAAACGGATTATTTGGTTTTTA
CACTCGATACAACAAGGCATCGCAAATTCATTGAGCACGTCCTTGATTCATCAAAAACAAAACTCATTTTGCAAAATATC
ACCACGCCAGTAAGAGACTGGGATGAACACCAACCTTTTTTGTATGTAGGTTTTGACCATGCAGAGGGAAGCCGAAAGCT
CGCTGAGGAATTTGGTAAGCGTTTTCCTAGGCACAGCAATTACAGCGTGCTCTATTTTTCTGAGGGGTACATCAGTGATA
TTCGCGGTGACACGTTCATAGAGCAAGTCACTCGCAACAATCAGTTTGAGTTACAGTCAGCCTATTATACCAAAGCGACG
AAAGCTTCGGGATATGATGCCACTAAAGCGAGTTTATCGAAGTACCCAGATGTGGAGTTTATCTACGCTTGTTCAACCGA
TGTGGCTTTGGGGGCTGTGGATGCATTGAAAGAGCTTGGTCGTGATGATGTGATGATTAATGGCTGGGGAGGCGGTTCTG
CTGAGCTAAAAGCGATTGAAAACGGTGACTTGGATATTACTGTAATGCGAATGAATGACGACACCGGTATCGCAATGGCA
GAAGCAATAAAGTGGGACCTAGAGGGCAAGTCGGTTCCGACCGTATACTCTGGGGACTTTGAAGTTGTGACTCAATCAGA
CTCGGCAGAGCGAATCAATGCTCTGAAAAAACGAGCATTTCGATACTCAGATAACTGA
ATGAGAAAATCGTTACTACTTTCCCTGATGTCGATAGCAGGCTTTTCGCCAGTAGCACAAGCCACTCAAGTATTGAATGG
TTACTGGGCCTATCAAGATTTTTTAGAACAATTTCCGGAACAAAAACAGTTAACCGAACAGTTGTCTAAAGCCGTTAGAG
ATCGCCCAACACCGCTATCGGTTTCACAAAAGCGTCCTCTTCGAATTTCAGTCGTTTATCCCGGTCAGCAGGTATCGGAT
TATTGGGTAAGAAATATTGATGCTTTTGAGCAACGTCTCGACAAGCTTAATATTAATTATCAAATCAATCAGGTATTTAC
GCGTCCAAACTCAGATGTTAAGCAACAAAGCTTATCACTAATGGAAGCACTTAAGAATAAAACGGATTATTTGGTTTTTA
CACTCGATACAACAAGGCATCGCAAATTCATTGAGCACGTCCTTGATTCATCAAAAACAAAACTCATTTTGCAAAATATC
ACCACGCCAGTAAGAGACTGGGATGAACACCAACCTTTTTTGTATGTAGGTTTTGACCATGCAGAGGGAAGCCGAAAGCT
CGCTGAGGAATTTGGTAAGCGTTTTCCTAGGCACAGCAATTACAGCGTGCTCTATTTTTCTGAGGGGTACATCAGTGATA
TTCGCGGTGACACGTTCATAGAGCAAGTCACTCGCAACAATCAGTTTGAGTTACAGTCAGCCTATTATACCAAAGCGACG
AAAGCTTCGGGATATGATGCCACTAAAGCGAGTTTATCGAAGTACCCAGATGTGGAGTTTATCTACGCTTGTTCAACCGA
TGTGGCTTTGGGGGCTGTGGATGCATTGAAAGAGCTTGGTCGTGATGATGTGATGATTAATGGCTGGGGAGGCGGTTCTG
CTGAGCTAAAAGCGATTGAAAACGGTGACTTGGATATTACTGTAATGCGAATGAATGACGACACCGGTATCGCAATGGCA
GAAGCAATAAAGTGGGACCTAGAGGGCAAGTCGGTTCCGACCGTATACTCTGGGGACTTTGAAGTTGTGACTCAATCAGA
CTCGGCAGAGCGAATCAATGCTCTGAAAAAACGAGCATTTCGATACTCAGATAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
65.479 |
100 |
0.655 |