Detailed information NTG0837442

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QN061_RS14230
• Genome accession: NZ_CP126305
• Coordinates: 3028639..3029646 (-)
• Length: 335 a.a.
• NCBI ID: WP_020429332.1
• Uniprot ID: A0AAX2LJL2
• Organism: Vibrio fluvialis strain SD21SC3889PM
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3023639..3034646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QN061_RS14205 (QN061_14205)	rraA	3024280..3024807 (-)	528	WP_020329402.1	ribonuclease E activity regulator RraA	-
QN061_RS14210 (QN061_14210)	-	3024883..3025800 (-)	918	WP_020329401.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QN061_RS14215 (QN061_14215)	hslU	3025889..3027220 (-)	1332	WP_020329400.1	HslU--HslV peptidase ATPase subunit	-
QN061_RS14220 (QN061_14220)	hslV	3027262..3027816 (-)	555	WP_020329399.1	ATP-dependent protease subunit HslV	-
QN061_RS14225 (QN061_14225)	ftsN	3027952..3028509 (-)	558	WP_024373673.1	cell division protein FtsN	-
QN061_RS14230 (QN061_14230)	cytR	3028639..3029646 (-)	1008	WP_020429332.1	DNA-binding transcriptional regulator CytR	Regulator
QN061_RS14235 (QN061_14235)	priA	3029951..3032152 (-)	2202	WP_047460339.1	primosomal protein N'	-
QN061_RS14240 (QN061_14240)	rpmE	3032398..3032616 (+)	219	WP_020329395.1	50S ribosomal protein L31	-
QN061_RS14245 (QN061_14245)	-	3032828..3034105 (+)	1278	WP_020329394.1	malic enzyme-like NAD(P)-binding protein	-
QN061_RS14250 (QN061_14250)	metJ	3034182..3034499 (-)	318	WP_020329393.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36914.45 Da
• Isoelectric Point: 6.3516

>NTDB_id=837442 QN061_RS14230 WP_020429332.1 3028639..3029646(-) (cytR) [Vibrio fluvialis strain SD21SC3889PM]
MATMKDVAQLAGVSTATVSRALMNPEKVSASTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYYTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQMGHKRVAQIAGPEAAVLCQFRQQGYQQALRRAGITRNPTYSMSGDFTFESGAKAVRQLLALPEPPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TQLVVRESAAPPRSM

Nucleotide

• Length: 1008 bp

>NTDB_id=837442 QN061_RS14230 WP_020429332.1 3028639..3029646(-) (cytR) [Vibrio fluvialis strain SD21SC3889PM]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGCGTTTCGACGGCGACGGTCTCGCGCGCTCTGATGAATCCCGAAAA
AGTTTCAGCCTCAACCCGTAAGCGGGTCGAGGAAGCAGTTTTAGAAGCTGGCTATTCACCGAATTCTTTGGCCCGAAATC
TGCGCCGCAATGAGTCAAAAACCATTGTCGCGATAGTGCCGGACATCTGTGACCCTTATTACACAGAGATCATTCGTGGT
ATCGAAGATGCTGCAATGGAACACGGTTATCTGGTGCTGCTGGGCGACAGCGGACAGCAGAAAAAACGTGAAAGCTCATT
TGTGAACCTGGTGTTTACCAAACAAGCGGACGGCATGTTACTGCTGGGGACTGACTTGCCGTTTGATGTGAGCAAACCCG
AGCAGAAAAACCTGCCACCGATGGTGATGGCATGTGAGTTTGCGCCGGAGCTTGAGCTACCTACGGTACACATTGATAAC
CTGACATCGGCGTTTGAAGCCGTGAACTATCTGACTCAGATGGGGCACAAGCGCGTGGCGCAAATCGCCGGACCGGAAGC
CGCGGTGCTGTGTCAGTTCCGTCAGCAAGGTTATCAGCAGGCGCTGCGTCGTGCGGGTATCACTCGCAATCCGACCTACA
GTATGAGTGGTGACTTTACTTTTGAGTCCGGAGCCAAAGCGGTGCGTCAATTATTGGCCCTGCCTGAGCCACCAACGGCT
ATCTTCTGTCACAACGATACCATGGCGATTGGCGCGATTCAGGAAGCGAAACGTCTGGGACTGCGCGTACCGCAGGATCT
CTCTGTGGTGGGCTTTGATGACATTCAATTCGCCCAGTACTGCGATCCACCGCTGACGACCATCTCTCAGCCTCGCTACG
AGATTGGCCGTCAGGCGATGCTGATGATGCTGGAATTGCTGCGTGGTCATGACGTGCGTGCCGGCTCACGTTTGCTGGAA
ACTCAGCTGGTGGTGCGTGAGAGCGCAGCGCCGCCTCGTTCGATGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	94.277	99.104	0.934
cytR	Vibrio parahaemolyticus RIMD 2210633	90.691	99.403	0.901