Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   U9S62_RS32520 Genome accession   NZ_CP141683
Coordinates   6902720..6903106 (+) Length   128 a.a.
NCBI ID   WP_010792598.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain ZM21     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6897720..6908106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U9S62_RS32500 (U9S62_32500) - 6898379..6899278 (-) 900 WP_010792594.1 ParA family protein -
  U9S62_RS32505 (U9S62_32505) - 6899453..6900874 (-) 1422 WP_223198330.1 hypothetical protein -
  U9S62_RS32510 (U9S62_32510) - 6901015..6901875 (-) 861 WP_010792597.1 ParB/RepB/Spo0J family partition protein -
  U9S62_RS32515 (U9S62_32515) - 6901937..6902578 (-) 642 WP_019439026.1 hypothetical protein -
  U9S62_RS32520 (U9S62_32520) pilG 6902720..6903106 (+) 387 WP_010792598.1 response regulator Regulator
  U9S62_RS32525 (U9S62_32525) - 6903096..6903584 (+) 489 WP_019439027.1 chemotaxis protein CheW -
  U9S62_RS32530 (U9S62_32530) - 6903596..6905605 (+) 2010 WP_021018430.1 methyl-accepting chemotaxis protein -
  U9S62_RS32535 (U9S62_32535) - 6905602..6906393 (+) 792 WP_019439029.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 13979.29 Da        Isoelectric Point: 5.1752

>NTDB_id=837247 U9S62_RS32520 WP_010792598.1 6902720..6903106(+) (pilG) [Pseudomonas aeruginosa strain ZM21]
MSNIRSVCIVDDSPGMRKMGAGFLQKADIEVHLAKDGYEALRVIREARPDACFIDIEMPNLDGLKLASILRASTQFKHLP
IAMLSSASSPFDIQKGLLAGADLYLTKPFTGDKIAKALIDMEAIIDEQ

Nucleotide


Download         Length: 387 bp        

>NTDB_id=837247 U9S62_RS32520 WP_010792598.1 6902720..6903106(+) (pilG) [Pseudomonas aeruginosa strain ZM21]
ATGTCCAATATTCGATCTGTCTGCATCGTCGACGACTCCCCCGGAATGCGGAAGATGGGGGCCGGCTTTCTGCAGAAAGC
TGATATCGAGGTTCACCTCGCAAAGGATGGGTACGAGGCCCTGCGTGTTATTCGCGAGGCTAGGCCTGATGCGTGCTTCA
TCGACATCGAAATGCCTAACCTGGACGGATTGAAGCTTGCCTCAATCCTACGAGCTTCGACTCAATTCAAGCACCTACCC
ATCGCCATGCTTTCCAGTGCGAGTTCACCTTTCGACATACAGAAAGGGCTCTTGGCAGGCGCAGATCTCTACCTGACCAA
GCCGTTCACAGGCGACAAGATCGCGAAAGCACTCATTGATATGGAAGCGATTATCGATGAGCAGTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-118)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

42.857

87.5

0.375