Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   P7644_RS16625 Genome accession   NZ_CP126238
Coordinates   3498459..3498851 (-) Length   130 a.a.
NCBI ID   WP_404300349.1    Uniprot ID   -
Organism   Alicycliphilus denitrificans strain Ylb10     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3493459..3503851
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7644_RS16610 (P7644_16580) - 3495111..3497354 (-) 2244 WP_404300346.1 methyl-accepting chemotaxis protein -
  P7644_RS16615 (P7644_16585) - 3497373..3497900 (-) 528 WP_404300347.1 chemotaxis protein CheW -
  P7644_RS16620 (P7644_16590) - 3498082..3498447 (-) 366 WP_404300348.1 PleD family two-component system response regulator -
  P7644_RS16625 (P7644_16595) pilG 3498459..3498851 (-) 393 WP_404300349.1 PleD family two-component system response regulator Regulator
  P7644_RS16630 (P7644_16600) - 3498904..3499077 (-) 174 WP_404300350.1 rubredoxin -
  P7644_RS16635 (P7644_16605) - 3499211..3500110 (+) 900 WP_404300351.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  P7644_RS16640 (P7644_16610) hemL 3500094..3501404 (+) 1311 WP_404300352.1 glutamate-1-semialdehyde 2,1-aminomutase -
  P7644_RS16645 (P7644_16615) purH 3501492..3503093 (-) 1602 WP_404300353.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  P7644_RS16650 (P7644_16620) - 3503176..3503412 (-) 237 WP_404300354.1 Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14530.67 Da        Isoelectric Point: 6.4507

>NTDB_id=837237 P7644_RS16625 WP_404300349.1 3498459..3498851(-) (pilG) [Alicycliphilus denitrificans strain Ylb10]
MATTTSDPTFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFEALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNAR
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGHAQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=837237 P7644_RS16625 WP_404300349.1 3498459..3498851(-) (pilG) [Alicycliphilus denitrificans strain Ylb10]
TTGGCTACGACGACAAGCGATCCTACTTTCAGAGTGCTCGTGGTGGACGATAGCAACACCATCAGGCGCAGTGCGGAAAT
CTTCTTGAAGCAGGGCGGCCATGAAGTGCTGCTCGCCGACGATGGTTTCGAAGCCCTGGCCAAGGTCAATGACTACCAGC
CCCAGCTGATCTTCTGCGACATCCTGATGCCCAAGCTCGATGGCTATCAGACCTGCGCCATTATCAAGCGCAATGCGCGT
TTTGCCGACACGCCGGTGGTGATGCTGTCGTCCAAGGACGGGGTTTTCGACAAGGCGCGCGGGCGCATGGTCGGTTGCCA
GGAATACCTCACCAAACCATTCACCAAAGATCAATTGCTGCAGGCCGTGCAGCAATTCGGACATGCGCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

57.265

90

0.515