Detailed information
Bioinformatically predicted
Overview
| Name | luxO | Type | Regulator |
| Locus tag | VA249_RS04595 | Genome accession | NZ_AP024165 |
| Coordinates | 1002005..1003408 (+) | Length | 467 a.a. |
| NCBI ID | WP_221069110.1 | Uniprot ID | - |
| Organism | Vibrio alfacsensis strain 04Ya108 | ||
| Function | promote HapR production (predicted from homology) Competence regulation |
||
Genomic Context
Location: 997005..1008408
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VA249_RS04590 (VYA_08720) | uvrB | 999668..1001698 (+) | 2031 | WP_221069109.1 | excinuclease ABC subunit UvrB | - |
| VA249_RS04595 (VYA_08730) | luxO | 1002005..1003408 (+) | 1404 | WP_221069110.1 | quorum-sensing sigma-54 dependent transcriptional regulator LuxO | Regulator |
| VA249_RS04600 (VYA_08740) | luxU | 1003405..1003749 (+) | 345 | WP_221069111.1 | quorum-sensing phosphorelay protein LuxU | - |
| VA249_RS04605 (VYA_08750) | - | 1003826..1004719 (-) | 894 | WP_221069112.1 | YvcK family protein | - |
| VA249_RS04610 (VYA_08760) | moaA | 1005015..1006004 (+) | 990 | WP_221069113.1 | GTP 3',8-cyclase MoaA | - |
| VA249_RS04615 (VYA_08770) | moaB | 1006101..1006613 (+) | 513 | WP_128811251.1 | molybdenum cofactor biosynthesis protein B | - |
| VA249_RS04620 (VYA_08780) | moaC | 1006639..1007115 (+) | 477 | WP_005433216.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| VA249_RS04625 (VYA_08790) | moaD | 1007115..1007372 (+) | 258 | WP_221069114.1 | molybdopterin synthase sulfur carrier subunit | - |
| VA249_RS04630 (VYA_08800) | moaE | 1007374..1007829 (+) | 456 | WP_221069115.1 | molybdopterin synthase catalytic subunit MoaE | - |
Sequence
Protein
Download Length: 467 a.a. Molecular weight: 51895.39 Da Isoelectric Point: 6.8236
>NTDB_id=83721 VA249_RS04595 WP_221069110.1 1002005..1003408(+) (luxO) [Vibrio alfacsensis strain 04Ya108]
MQHKPDGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGREAIDSLNHRTPDLILLDLRLPDMTGMDVLHKVKDSH
PSVPVIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLKNEANNPGNQSYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGEDVIEIAYSLLGYMSHEEGKSFVRFSQDVIDKFNRYEWPGNVRQLQNVLRNIVVLNNGKEITIDMLPPPLNMPLVGRA
IVSPMPQKAITASDITPLWMTEKEAIEQAIKACDGNIPRAAGYLDVSPSTIYRKLQAWGTKEEKQNV
MQHKPDGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGREAIDSLNHRTPDLILLDLRLPDMTGMDVLHKVKDSH
PSVPVIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLKNEANNPGNQSYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGEDVIEIAYSLLGYMSHEEGKSFVRFSQDVIDKFNRYEWPGNVRQLQNVLRNIVVLNNGKEITIDMLPPPLNMPLVGRA
IVSPMPQKAITASDITPLWMTEKEAIEQAIKACDGNIPRAAGYLDVSPSTIYRKLQAWGTKEEKQNV
Nucleotide
Download Length: 1404 bp
>NTDB_id=83721 VA249_RS04595 WP_221069110.1 1002005..1003408(+) (luxO) [Vibrio alfacsensis strain 04Ya108]
ATGCAACATAAACCAGATGGTCAAAAGTCTCGTTATCTTTTGATGGTTGAAGATACCGCGTCTGTCGCCGCATTATACCG
TTCATACCTTACGCCTCTTGGCATCGACATTAACATTGTCGGTACTGGCCGAGAAGCGATCGACAGTTTAAATCATCGCA
CCCCTGACCTTATTCTGTTAGATCTTCGTCTGCCAGATATGACGGGAATGGATGTGCTACATAAGGTTAAAGATAGTCAC
CCAAGTGTGCCTGTTATCTTCATGACTGCTCACGGCTCGATTGATACCGCTGTAGAAGCGATGCGTCATGGTTCTCAAGA
TTTCCTGATCAAACCATGTGAAGCAGACCGATTACGCGTTACCGTAAATAATGCGATTCGCAAAGCCACTAAGCTGAAAA
ACGAAGCTAACAATCCGGGCAACCAAAGTTATCAAGGTTTTATCGGCAGTAGCCAAACCATGCAGCAGGTTTACCGGACT
ATTGACTCTGCAGCCAGTAGTAAAGCGAGTATCTTTATCACCGGTGAGAGTGGTACGGGTAAAGAAGTGTGTGCTGAAGC
CATTCACGCAGCGAGTAAACGCGGTGATAAGCCATTTATTGCCATTAACTGTGCTGCCATTCCAAAAGACCTCATTGAGA
GCGAGTTGTTTGGTCACGTAAAAGGTGCGTTTACGGGCGCTGCTAATGATCGTCAAGGCGCCGCAGAACTCGCCGATGGT
GGTACCTTGTTCCTTGATGAGTTGTGTGAAATGGACTTGGATTTACAAACCAAGCTTTTGAGATTCATCCAAACGGGGAC
ATTCCAAAAAGTGGGCTCTTCAAAAATGAAGAGTGTGGACGTGCGCTTTGTATGTGCGACGAACCGGGACCCATGGAAAG
AGGTGCAAGAAGGGCGCTTTCGTGAAGATTTGTATTACCGTTTATATGTGATTCCGTTGCACCTGCCACCACTAAGAGAA
CGTGGTGAGGATGTTATCGAAATCGCTTATTCGTTATTAGGTTACATGTCTCATGAAGAAGGCAAGAGCTTTGTTCGTTT
CTCTCAAGACGTGATTGATAAATTTAATCGCTATGAGTGGCCTGGAAACGTTCGTCAATTGCAAAACGTTCTGAGGAATA
TCGTGGTGCTAAATAATGGTAAAGAGATTACCATCGATATGCTACCGCCTCCGCTTAATATGCCGCTTGTTGGCCGTGCC
ATTGTAAGCCCAATGCCTCAAAAGGCGATAACGGCGTCAGACATCACCCCGTTATGGATGACTGAAAAAGAAGCCATTGA
GCAGGCGATCAAGGCTTGTGATGGGAATATTCCTAGAGCGGCAGGATATTTAGATGTCAGCCCATCAACGATTTATCGTA
AGCTTCAAGCTTGGGGAACGAAAGAAGAAAAACAAAACGTATGA
ATGCAACATAAACCAGATGGTCAAAAGTCTCGTTATCTTTTGATGGTTGAAGATACCGCGTCTGTCGCCGCATTATACCG
TTCATACCTTACGCCTCTTGGCATCGACATTAACATTGTCGGTACTGGCCGAGAAGCGATCGACAGTTTAAATCATCGCA
CCCCTGACCTTATTCTGTTAGATCTTCGTCTGCCAGATATGACGGGAATGGATGTGCTACATAAGGTTAAAGATAGTCAC
CCAAGTGTGCCTGTTATCTTCATGACTGCTCACGGCTCGATTGATACCGCTGTAGAAGCGATGCGTCATGGTTCTCAAGA
TTTCCTGATCAAACCATGTGAAGCAGACCGATTACGCGTTACCGTAAATAATGCGATTCGCAAAGCCACTAAGCTGAAAA
ACGAAGCTAACAATCCGGGCAACCAAAGTTATCAAGGTTTTATCGGCAGTAGCCAAACCATGCAGCAGGTTTACCGGACT
ATTGACTCTGCAGCCAGTAGTAAAGCGAGTATCTTTATCACCGGTGAGAGTGGTACGGGTAAAGAAGTGTGTGCTGAAGC
CATTCACGCAGCGAGTAAACGCGGTGATAAGCCATTTATTGCCATTAACTGTGCTGCCATTCCAAAAGACCTCATTGAGA
GCGAGTTGTTTGGTCACGTAAAAGGTGCGTTTACGGGCGCTGCTAATGATCGTCAAGGCGCCGCAGAACTCGCCGATGGT
GGTACCTTGTTCCTTGATGAGTTGTGTGAAATGGACTTGGATTTACAAACCAAGCTTTTGAGATTCATCCAAACGGGGAC
ATTCCAAAAAGTGGGCTCTTCAAAAATGAAGAGTGTGGACGTGCGCTTTGTATGTGCGACGAACCGGGACCCATGGAAAG
AGGTGCAAGAAGGGCGCTTTCGTGAAGATTTGTATTACCGTTTATATGTGATTCCGTTGCACCTGCCACCACTAAGAGAA
CGTGGTGAGGATGTTATCGAAATCGCTTATTCGTTATTAGGTTACATGTCTCATGAAGAAGGCAAGAGCTTTGTTCGTTT
CTCTCAAGACGTGATTGATAAATTTAATCGCTATGAGTGGCCTGGAAACGTTCGTCAATTGCAAAACGTTCTGAGGAATA
TCGTGGTGCTAAATAATGGTAAAGAGATTACCATCGATATGCTACCGCCTCCGCTTAATATGCCGCTTGTTGGCCGTGCC
ATTGTAAGCCCAATGCCTCAAAAGGCGATAACGGCGTCAGACATCACCCCGTTATGGATGACTGAAAAAGAAGCCATTGA
GCAGGCGATCAAGGCTTGTGATGGGAATATTCCTAGAGCGGCAGGATATTTAGATGTCAGCCCATCAACGATTTATCGTA
AGCTTCAAGCTTGGGGAACGAAAGAAGAAAAACAAAACGTATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxO | Vibrio cholerae strain A1552 |
84.34 |
95.717 |
0.807 |