Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QN242_RS06145 Genome accession   NZ_CP126173
Coordinates   1484814..1485215 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas rydalmerensis strain DAR34882     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1479814..1490215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN242_RS06135 (QN242_06140) - 1482744..1483625 (-) 882 WP_167087983.1 energy transducer TonB -
  QN242_RS06140 (QN242_06145) gshB 1483622..1484572 (-) 951 WP_184446929.1 glutathione synthase -
  QN242_RS06145 (QN242_06150) pilG 1484814..1485215 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  QN242_RS06150 (QN242_06155) - 1485234..1485596 (+) 363 WP_026144622.1 response regulator -
  QN242_RS06155 (QN242_06160) - 1485598..1486128 (+) 531 WP_160965644.1 chemotaxis protein CheW -
  QN242_RS06160 (QN242_06165) - 1486169..1488205 (+) 2037 WP_317844828.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=837090 QN242_RS06145 WP_003472648.1 1484814..1485215(+) (pilG) [Xanthomonas rydalmerensis strain DAR34882]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=837090 QN242_RS06145 WP_003472648.1 1484814..1485215(+) (pilG) [Xanthomonas rydalmerensis strain DAR34882]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGCTTGCGGGTGATGGTGATCGACGATTCGAAAACAATCCGTCG
TACCGCCGAAACATTGCTGAAGCGCGAAGGGTGCGAAGTGGTGACGGCCACCGACGGCTTCGAGGCCTTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATTTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCCACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGGTCCGAGCAGTACCTCACCAAACCCTTTACACGCGAAGAGCTGCTGGGCGCGATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677