Detailed information NTG0836957

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: QNN06_RS23635
• Genome accession: NZ_CP126144
• Coordinates: 4822568..4823620 (-)
• Length: 350 a.a.
• NCBI ID: WP_217033922.1
• Uniprot ID: -
• Organism: Neobacillus sp. 114
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4817568..4828620

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNN06_RS23595	-	4818531..4819322 (+)	792	WP_213120192.1	YqhG family protein	-
QNN06_RS23600	-	4819367..4819564 (-)	198	WP_213120191.1	YqzE family protein	-
QNN06_RS23605	comGG	4819621..4820001 (-)	381	WP_284036029.1	competence type IV pilus minor pilin ComGG	-
QNN06_RS23610	comGF	4819998..4820474 (-)	477	WP_284036030.1	competence type IV pilus minor pilin ComGF	-
QNN06_RS23615	comGE	4820422..4820754 (-)	333	WP_213120189.1	competence type IV pilus minor pilin ComGE	-
QNN06_RS23620	comGD	4820738..4821178 (-)	441	WP_213120188.1	competence type IV pilus minor pilin ComGD	-
QNN06_RS23625	comGC	4821178..4821525 (-)	348	WP_213120187.1	competence type IV pilus major pilin ComGC	-
QNN06_RS23630	comGB	4821550..4822584 (-)	1035	WP_349654921.1	competence type IV pilus assembly protein ComGB	-
QNN06_RS23635	comGA	4822568..4823620 (-)	1053	WP_217033922.1	competence type IV pilus ATPase ComGA	Machinery gene
QNN06_RS23640	-	4823878..4824576 (+)	699	WP_217033686.1	helix-turn-helix domain-containing protein	-
QNN06_RS23645	-	4824662..4824904 (+)	243	WP_213120184.1	DUF2626 domain-containing protein	-
QNN06_RS23650	-	4824934..4826031 (-)	1098	WP_284036032.1	SAM-dependent methyltransferase	-
QNN06_RS23655	-	4826219..4826854 (-)	636	WP_284036033.1	MBL fold metallo-hydrolase	-
QNN06_RS23660	-	4826949..4827425 (+)	477	WP_213120181.1	hypothetical protein	-
QNN06_RS23665	-	4827529..4827705 (+)	177	WP_213120180.1	DUF2759 domain-containing protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 39464.68 Da
• Isoelectric Point: 8.6992

>NTDB_id=836957 QNN06_RS23635 WP_217033922.1 4822568..4823620(-) (comGA) [Neobacillus sp. 114]
MLADRIIRDAARNQATDIHIIPRQNDTLVQIRLTNKLIPRLSLPKDECDKLISHFKFKANMDIGERRRPQSGAIFCEVNG
QLMGLRLSTLPSNTRESLVIRLLPQQEQIPFHQLSLFPAMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYSLLNETAHLF
HRNVITLEDPIEKNYDSVLQVQVNEKAGVTYAAGLKAILRHDPDIIMVGEIRDAETARIAVRAALTGHLVLSTMHTRDAK
GAVFRLHEFGVNWLEVEQTLIAVTAQRLVELTCPFCEGECTPFCYSYGRWKRASVFELLAGKNLNNAMKAAKGEKVETHY
RAIRDVIKKGIALGFIQESEYDRLVYDEES

Nucleotide

• Length: 1053 bp

>NTDB_id=836957 QNN06_RS23635 WP_217033922.1 4822568..4823620(-) (comGA) [Neobacillus sp. 114]
ATGTTAGCTGATAGAATTATTCGTGACGCTGCAAGAAACCAGGCAACTGACATTCACATAATTCCCAGGCAAAATGACAC
ACTCGTTCAAATCCGGTTAACCAACAAACTCATTCCTCGATTATCCCTTCCAAAAGATGAATGCGACAAATTGATCTCCC
ATTTTAAATTTAAAGCAAATATGGATATCGGCGAAAGAAGACGTCCGCAAAGCGGTGCAATTTTTTGTGAGGTTAACGGA
CAATTAATGGGGCTGAGGCTATCTACCCTACCATCGAATACACGCGAAAGCCTTGTCATCAGGCTATTACCCCAGCAGGA
GCAAATCCCTTTTCATCAACTTTCCTTATTCCCGGCAATGACCAGAAAACTTCTAGCTTTATTAAAACATGCACACGGTT
TAATAATTTTTACTGGGCCGACTGGCTCAGGGAAAACGACTACATTATATTCTCTTTTAAATGAAACCGCCCACCTATTC
CATCGCAATGTTATTACACTTGAAGACCCGATTGAAAAAAATTACGATTCCGTTCTGCAGGTACAAGTGAATGAAAAAGC
TGGTGTCACTTATGCGGCCGGCCTCAAAGCAATCTTAAGGCACGACCCGGACATCATAATGGTCGGGGAAATAAGGGACG
CAGAAACAGCTAGGATTGCTGTACGCGCAGCTTTAACAGGGCATTTAGTGCTTTCAACGATGCACACTAGAGATGCGAAG
GGAGCGGTGTTCCGCCTGCACGAATTTGGGGTGAATTGGCTGGAGGTTGAACAGACCTTAATTGCGGTGACTGCCCAAAG
ACTTGTTGAATTAACCTGTCCATTTTGCGAGGGTGAATGCACTCCATTTTGTTATTCGTATGGAAGGTGGAAGAGGGCGA
GTGTGTTTGAGCTTTTGGCCGGGAAAAATTTGAATAACGCCATGAAAGCTGCAAAGGGAGAGAAGGTTGAAACCCATTAT
CGGGCAATCCGGGATGTCATTAAAAAAGGGATTGCCTTAGGATTTATTCAGGAATCTGAATACGACAGGCTGGTTTATGA
TGAAGAATCATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (6-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Bacillus subtilis subsp. subtilis str. 168	55.587	99.714	0.554
pilB	Glaesserella parasuis strain SC1401	38.636	100	0.389