Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QNN06_RS09310 Genome accession   NZ_CP126144
Coordinates   1860932..1861879 (+) Length   315 a.a.
NCBI ID   WP_213116623.1    Uniprot ID   A0A942YTR5
Organism   Neobacillus sp. 114     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1855932..1866879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNN06_RS09295 - 1858557..1858739 (-) 183 WP_213116626.1 YjzD family protein -
  QNN06_RS09300 - 1859134..1859856 (+) 723 WP_284037494.1 alpha/beta hydrolase -
  QNN06_RS09305 - 1859933..1860790 (+) 858 WP_284037495.1 hypothetical protein -
  QNN06_RS09310 med 1860932..1861879 (+) 948 WP_213116623.1 BMP family ABC transporter substrate-binding protein Regulator
  QNN06_RS09315 - 1861910..1862245 (-) 336 WP_284037496.1 hypothetical protein -
  QNN06_RS09320 - 1862438..1863370 (+) 933 WP_213116621.1 beta-ketoacyl-ACP synthase III -
  QNN06_RS09325 fabF 1863443..1864681 (+) 1239 WP_213116620.1 beta-ketoacyl-ACP synthase II -
  QNN06_RS09330 - 1864810..1865604 (+) 795 WP_213116619.1 DUF2268 domain-containing protein -
  QNN06_RS09335 - 1865753..1866775 (+) 1023 WP_217032959.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 35305.93 Da        Isoelectric Point: 5.8663

>NTDB_id=836940 QNN06_RS09310 WP_213116623.1 1860932..1861879(+) (med) [Neobacillus sp. 114]
MLSRFGIIFLCLFLLSACGETKAQGHLQKAGLLVPDTVNDQVWATKGFNGLLKIQSKFNIDVFYKEGMNSEDKVEKAVKE
FDQKGVNLIFGHGSEYAEYFNKISKDYPNIHFVSFNGDAKTPNTTSLNFKGHAMGFFGGMVAAHMSKQHKVGVLAAYEWQ
PEIEGFYQGAMAEDKNTHVSIEYVGNWDDDNKSIQLVDRMLDTGVDVVYPAGDGFNVPVIERVKDRGQYVIGYVSEQSDF
GESTVLTSTIQQVDKLYVKVAEQFNNQKLKSGNLSFDFQDDVISLGKYSPLVDKGFIHKMDKYIETYKNSGNLPK

Nucleotide


Download         Length: 948 bp        

>NTDB_id=836940 QNN06_RS09310 WP_213116623.1 1860932..1861879(+) (med) [Neobacillus sp. 114]
ATGCTTAGCCGCTTCGGCATCATTTTTTTATGCCTTTTTTTACTAAGTGCTTGCGGGGAAACGAAAGCACAAGGCCACCT
GCAAAAGGCTGGTTTATTAGTGCCCGATACCGTAAATGATCAAGTGTGGGCCACGAAAGGCTTTAATGGACTGTTAAAGA
TTCAATCCAAATTTAATATCGATGTATTTTATAAAGAGGGCATGAATTCAGAGGATAAAGTAGAAAAGGCCGTAAAAGAG
TTTGATCAAAAAGGGGTCAATCTCATTTTCGGGCACGGGTCGGAATACGCCGAATATTTTAATAAAATTTCAAAGGATTA
TCCTAATATTCACTTTGTCAGTTTTAATGGTGATGCCAAAACACCCAACACCACCAGCCTGAACTTCAAGGGGCATGCGA
TGGGCTTTTTTGGGGGGATGGTTGCAGCCCATATGTCAAAGCAGCATAAAGTCGGAGTCTTGGCCGCCTATGAATGGCAG
CCGGAAATCGAAGGGTTTTACCAAGGAGCCATGGCGGAGGATAAAAATACCCATGTAAGTATTGAATATGTCGGCAATTG
GGATGATGATAATAAATCCATCCAATTAGTTGATCGAATGCTTGATACCGGTGTGGATGTTGTTTATCCTGCCGGGGATG
GGTTTAACGTACCCGTGATAGAAAGAGTAAAAGACCGAGGGCAATATGTGATTGGTTATGTTTCTGAACAATCGGATTTT
GGAGAATCGACGGTCTTAACCAGCACGATTCAACAGGTTGATAAATTGTACGTTAAGGTTGCCGAACAGTTTAATAACCA
GAAACTAAAGTCGGGGAATCTTTCCTTTGATTTTCAAGATGATGTCATTTCATTAGGCAAATACAGCCCTTTAGTAGACA
AGGGTTTTATCCATAAAATGGATAAATATATCGAGACCTATAAAAATTCCGGGAATCTCCCCAAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

52.698

100

0.527