Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   U7118_RS22225 Genome accession   NZ_CP141283
Coordinates   4130659..4131486 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain DKU_09     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 4125659..4136486
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U7118_RS22200 (U7118_22200) abrB 4128005..4128295 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  U7118_RS22205 (U7118_22205) rsmI 4128344..4129222 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  U7118_RS22210 (U7118_22210) yazA 4129197..4129496 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  U7118_RS22215 (U7118_22215) trmNF 4129483..4130226 (-) 744 WP_041338388.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  U7118_RS22220 (U7118_22220) yabA 4130285..4130644 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  U7118_RS22225 (U7118_22225) yaaT 4130659..4131486 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  U7118_RS22230 (U7118_22230) holB 4131489..4132478 (-) 990 WP_088272134.1 DNA polymerase III subunit delta' -
  U7118_RS22235 (U7118_22235) yaaR 4132490..4132930 (-) 441 WP_009966249.1 YaaR family protein -
  U7118_RS22240 (U7118_22240) darA 4132943..4133272 (-) 330 WP_088272133.1 cyclic di-AMP receptor DarA -
  U7118_RS22245 (U7118_22245) tmk 4133346..4133984 (-) 639 WP_003243137.1 dTMP kinase -
  U7118_RS22250 (U7118_22250) efpO 4133981..4135423 (-) 1443 WP_324271408.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=836801 U7118_RS22225 WP_003226767.1 4130659..4131486(-) (yaaT) [Bacillus subtilis strain DKU_09]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=836801 U7118_RS22225 WP_003226767.1 4130659..4131486(-) (yaaT) [Bacillus subtilis strain DKU_09]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996