Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QLQ22_RS23055 Genome accession   NZ_CP126116
Coordinates   4647331..4648281 (-) Length   316 a.a.
NCBI ID   WP_252207547.1    Uniprot ID   -
Organism   Metabacillus sp. CT-WN-B3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4642331..4653281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLQ22_RS23035 (QLQ22_23035) - 4643047..4644252 (-) 1206 WP_275976725.1 amidohydrolase -
  QLQ22_RS23040 (QLQ22_23040) - 4644669..4645616 (-) 948 WP_284015641.1 siderophore ABC transporter substrate-binding protein -
  QLQ22_RS23045 (QLQ22_23045) - 4645639..4646394 (-) 756 WP_284015642.1 ABC transporter ATP-binding protein -
  QLQ22_RS23050 (QLQ22_23050) - 4646388..4647338 (-) 951 WP_223438377.1 iron chelate uptake ABC transporter family permease subunit -
  QLQ22_RS23055 (QLQ22_23055) ceuB 4647331..4648281 (-) 951 WP_252207547.1 ABC transporter permease Machinery gene
  QLQ22_RS23060 (QLQ22_23060) - 4648484..4648915 (-) 432 WP_223438384.1 MarR family transcriptional regulator -
  QLQ22_RS23065 (QLQ22_23065) - 4649163..4649576 (-) 414 WP_223438385.1 VOC family protein -
  QLQ22_RS23070 (QLQ22_23070) cyoE 4649811..4650725 (+) 915 WP_223438387.1 heme o synthase -
  QLQ22_RS23075 (QLQ22_23075) - 4650894..4651214 (-) 321 WP_223438389.1 ribonuclease E inhibitor RraB -
  QLQ22_RS23080 (QLQ22_23080) - 4651372..4651530 (+) 159 WP_223438391.1 hypothetical protein -
  QLQ22_RS23085 (QLQ22_23085) - 4651568..4652296 (-) 729 WP_284015643.1 MerR family transcriptional regulator -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34903.15 Da        Isoelectric Point: 9.8264

>NTDB_id=836717 QLQ22_RS23055 WP_252207547.1 4647331..4648281(-) (ceuB) [Metabacillus sp. CT-WN-B3]
MKKRYLFLALIILSISSIFIGVKGITPLDLLNLQDDQVQILLISRLPRLISILIAGVSMSICGLIMQQLTRNKFVSPTTA
GTMDSARLGILVSLMIFTSASPLEKMGVAFVFALAGTFIFMKILERIRFKDTIFIPLVGLMFGNIIGSITTFFAYKNDLI
QNMSSWLQGDFSMIVKGQYELIYISIPLVIVAYFFANRFTVAGMGEEFSANLGLNYKQVVNIGLVIVALVTTVVILTAGV
IPFLGLIIPNIVSIYLGDNLKKSLPHTALLGAVFILFCDILGRIIIYPYEISIGLTVGVIGSIIFIYLLFRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=836717 QLQ22_RS23055 WP_252207547.1 4647331..4648281(-) (ceuB) [Metabacillus sp. CT-WN-B3]
ATGAAAAAGAGATATTTGTTTTTAGCGCTAATAATTTTATCAATTTCCTCCATTTTCATCGGGGTCAAGGGCATTACCCC
TCTAGATCTTCTGAATCTGCAGGATGATCAGGTGCAAATCCTCCTGATAAGCAGACTGCCGCGGCTCATCAGCATTTTGA
TTGCCGGTGTTAGTATGAGCATCTGCGGCTTAATCATGCAGCAGTTAACGAGGAACAAATTTGTCTCTCCGACCACAGCA
GGTACTATGGACTCGGCTAGATTGGGCATTTTAGTTTCGCTGATGATATTCACTTCGGCAAGTCCGCTTGAAAAGATGGG
TGTTGCCTTCGTTTTTGCACTAGCCGGTACGTTCATTTTTATGAAGATCTTAGAGAGAATCAGATTTAAAGATACGATCT
TCATTCCGCTTGTAGGTTTAATGTTCGGCAACATCATTGGTTCCATTACAACCTTTTTCGCCTACAAAAATGATTTGATT
CAAAACATGTCATCTTGGCTTCAGGGCGATTTTTCAATGATTGTAAAAGGGCAGTATGAGCTGATCTACATAAGCATTCC
TCTTGTTATTGTTGCGTATTTCTTTGCGAATCGATTTACGGTAGCGGGAATGGGAGAAGAGTTTTCAGCCAATCTGGGAC
TGAATTATAAGCAGGTTGTCAATATAGGTCTTGTGATTGTAGCTCTTGTGACAACGGTCGTTATTTTGACCGCGGGCGTC
ATTCCGTTCCTCGGATTAATCATTCCGAACATCGTCAGCATTTATTTAGGGGACAATCTGAAGAAAAGCCTGCCGCATAC
AGCTTTGCTTGGTGCAGTATTTATCCTGTTCTGTGATATTTTAGGGCGCATCATCATTTATCCGTATGAAATATCGATTG
GTTTGACTGTCGGTGTGATCGGAAGCATCATTTTCATTTATTTACTGTTTAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

56.667

94.937

0.538