Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   U7118_RS06130 Genome accession   NZ_CP141283
Coordinates   1163718..1164413 (+) Length   231 a.a.
NCBI ID   WP_069837705.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_09     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1158718..1169413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U7118_RS06105 (U7118_06105) ytrB 1158744..1159622 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  U7118_RS06110 (U7118_06110) - 1159616..1160602 (+) 987 WP_324271470.1 ABC transporter permease subunit -
  U7118_RS06115 (U7118_06115) ytrD 1160634..1161611 (+) 978 WP_014480623.1 ABC transporter permease YtrD -
  U7118_RS06120 (U7118_06120) ytrE 1161626..1162321 (+) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  U7118_RS06125 (U7118_06125) ytrF 1162311..1163621 (+) 1311 WP_069837706.1 ABC transporter permease YtrF -
  U7118_RS06130 (U7118_06130) braR 1163718..1164413 (+) 696 WP_069837705.1 two-component response regulator BceR Regulator
  U7118_RS06135 (U7118_06135) bceS 1164406..1165410 (+) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  U7118_RS06140 (U7118_06140) bceA 1165512..1166273 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  U7118_RS06145 (U7118_06145) bceB 1166263..1168203 (+) 1941 WP_014480619.1 bacitracin ABC transporter permease BceB -
  U7118_RS06150 (U7118_06150) yttA 1168240..1168986 (-) 747 WP_014480618.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26909.77 Da        Isoelectric Point: 5.3731

>NTDB_id=836690 U7118_RS06130 WP_069837705.1 1163718..1164413(+) (braR) [Bacillus subtilis strain DKU_09]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFSAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=836690 U7118_RS06130 WP_069837705.1 1163718..1164413(+) (braR) [Bacillus subtilis strain DKU_09]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTTCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTACACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAAGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377