Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   U7118_RS00350 Genome accession   NZ_CP141283
Coordinates   57024..57818 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain DKU_09     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 52024..62818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U7118_RS00330 (U7118_00330) walR 52266..52973 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  U7118_RS00335 (U7118_00335) walK 52981..54816 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  U7118_RS00340 (U7118_00340) walH 54806..56173 (+) 1368 WP_014481474.1 WalRK two-component regulatory system regulator WalH -
  U7118_RS00345 (U7118_00345) walI 56160..57002 (+) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  U7118_RS00350 (U7118_00350) vicX 57024..57818 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  U7118_RS00355 (U7118_00355) htrA 57900..59102 (+) 1203 WP_046161071.1 serine protease HtrC Regulator
  U7118_RS00360 (U7118_00360) - 59123..59255 (+) 133 Protein_67 hypothetical protein -
  U7118_RS00365 (U7118_00365) - 59283..59435 (+) 153 Protein_68 ATP-binding protein -
  U7118_RS00370 (U7118_00370) rocR 59417..60802 (-) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  U7118_RS00375 (U7118_00375) - 61029..61313 (+) 285 WP_015715052.1 autorepressor SdpR family transcription factor -
  U7118_RS00380 (U7118_00380) - 61313..61948 (+) 636 WP_014481470.1 SdpI family protein -
  U7118_RS00385 (U7118_00385) - 62276..62686 (+) 411 WP_231560755.1 SdpA family antimicrobial peptide system protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=836663 U7118_RS00350 WP_003226939.1 57024..57818(+) (vicX) [Bacillus subtilis strain DKU_09]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=836663 U7118_RS00350 WP_003226939.1 57024..57818(+) (vicX) [Bacillus subtilis strain DKU_09]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTAATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATTGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAATCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53