Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | QNH48_RS22465 | Genome accession | NZ_CP126115 |
| Coordinates | 4553004..4554086 (-) | Length | 360 a.a. |
| NCBI ID | WP_283952078.1 | Uniprot ID | A0AA95MW44 |
| Organism | Neobacillus sp. YX16 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4548004..4559086
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QNH48_RS22425 (QNH48_22425) | - | 4548766..4549557 (+) | 792 | WP_095247103.1 | YqhG family protein | - |
| QNH48_RS22430 (QNH48_22430) | - | 4549822..4550007 (-) | 186 | WP_095247127.1 | YqzE family protein | - |
| QNH48_RS22435 (QNH48_22435) | comGG | 4550077..4550460 (-) | 384 | WP_283952074.1 | competence type IV pilus minor pilin ComGG | - |
| QNH48_RS22440 (QNH48_22440) | comGF | 4550457..4550897 (-) | 441 | WP_283955853.1 | competence type IV pilus minor pilin ComGF | - |
| QNH48_RS22445 (QNH48_22445) | - | 4550881..4551219 (-) | 339 | WP_283952075.1 | hypothetical protein | - |
| QNH48_RS22450 (QNH48_22450) | comGD | 4551203..4551637 (-) | 435 | WP_283952076.1 | competence type IV pilus minor pilin ComGD | - |
| QNH48_RS22455 (QNH48_22455) | comGC | 4551637..4551951 (-) | 315 | WP_283955854.1 | competence type IV pilus major pilin ComGC | - |
| QNH48_RS22460 (QNH48_22460) | comGB | 4551986..4553017 (-) | 1032 | WP_283952077.1 | competence type IV pilus assembly protein ComGB | - |
| QNH48_RS22465 (QNH48_22465) | comGA | 4553004..4554086 (-) | 1083 | WP_283952078.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QNH48_RS22470 (QNH48_22470) | - | 4554383..4555078 (+) | 696 | WP_283952079.1 | helix-turn-helix domain-containing protein | - |
| QNH48_RS22475 (QNH48_22475) | - | 4555159..4555401 (+) | 243 | WP_095247095.1 | DUF2626 domain-containing protein | - |
| QNH48_RS22480 (QNH48_22480) | - | 4555447..4556529 (-) | 1083 | WP_283952080.1 | SAM-dependent methyltransferase | - |
| QNH48_RS22485 (QNH48_22485) | - | 4556723..4557358 (-) | 636 | WP_283952081.1 | MBL fold metallo-hydrolase | - |
| QNH48_RS22490 (QNH48_22490) | - | 4557554..4557730 (+) | 177 | WP_095247093.1 | DUF2759 domain-containing protein | - |
| QNH48_RS22495 (QNH48_22495) | - | 4557769..4558911 (-) | 1143 | WP_283952082.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 360 a.a. Molecular weight: 40542.05 Da Isoelectric Point: 9.2534
>NTDB_id=836650 QNH48_RS22465 WP_283952078.1 4553004..4554086(-) (comGA) [Neobacillus sp. YX16]
MLFIVSSIEILANRIITDAARNQATDIHIVPRKKDTLIQIRLTNKLIPRLSLPKDECDRLISHFKFTANMDIGERRRPQS
GAIFCEVDGKLMGLRLSTLPSNNRESLVIRLLPQQEQIPFHQLSLFPGMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYS
LLNETAHLFHRNVITLEDPIEKNYDSVLQIQVNEKAGVTYAAGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVL
STMHTRDAKGAVYRLHEFGVNWLEVEQTLIAVTAQRLVELTCPYCQGECSPFCYSYGRWKRASVFELLSGRNLNAAMKEA
KGENIISRYTTVRKVINKGIALGYIKESEYDRLVYDHEAP
MLFIVSSIEILANRIITDAARNQATDIHIVPRKKDTLIQIRLTNKLIPRLSLPKDECDRLISHFKFTANMDIGERRRPQS
GAIFCEVDGKLMGLRLSTLPSNNRESLVIRLLPQQEQIPFHQLSLFPGMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYS
LLNETAHLFHRNVITLEDPIEKNYDSVLQIQVNEKAGVTYAAGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVL
STMHTRDAKGAVYRLHEFGVNWLEVEQTLIAVTAQRLVELTCPYCQGECSPFCYSYGRWKRASVFELLSGRNLNAAMKEA
KGENIISRYTTVRKVINKGIALGYIKESEYDRLVYDHEAP
Nucleotide
Download Length: 1083 bp
>NTDB_id=836650 QNH48_RS22465 WP_283952078.1 4553004..4554086(-) (comGA) [Neobacillus sp. YX16]
GTGTTATTCATTGTAAGTTCAATTGAAATACTAGCAAATAGGATTATCACAGATGCTGCAAGAAACCAAGCTACAGATAT
TCACATTGTACCAAGAAAGAAAGACACTCTCATTCAAATCCGCTTAACGAACAAACTCATTCCCCGGTTATCACTTCCAA
AAGATGAATGCGACAGATTAATTTCACATTTTAAGTTTACTGCAAATATGGATATCGGAGAACGAAGACGCCCACAAAGC
GGTGCGATTTTTTGTGAGGTGGATGGAAAATTAATGGGTCTTAGACTTTCAACCCTTCCATCTAACAATCGAGAAAGTCT
GGTTATCAGACTATTGCCTCAACAAGAACAGATTCCCTTTCACCAACTCTCACTTTTTCCTGGAATGACCAGAAAACTAC
TTGCCCTTCTAAAACACGCACATGGATTAATTATCTTTACTGGTCCGACCGGATCGGGAAAAACCACAACTCTTTACTCC
CTTTTAAATGAAACCGCACATCTTTTTCATCGTAACGTAATCACACTTGAAGACCCTATCGAAAAAAACTACGATTCTGT
TTTACAAATACAAGTGAATGAAAAAGCGGGCGTAACATACGCTGCTGGCCTTAAGGCGATTCTTCGTCATGATCCCGACA
TTATTATGGTCGGTGAAATACGTGATGCGGAAACGGCTAAAATTGCAGTGCGGGCTGCATTAACGGGACATTTGGTACTC
AGTACAATGCATACAAGGGATGCGAAGGGGGCGGTATATCGTCTCCATGAGTTTGGTGTAAATTGGTTAGAGGTAGAACA
AACCTTAATTGCTGTTACAGCACAACGATTAGTGGAGCTAACATGTCCGTATTGCCAAGGGGAGTGTTCGCCCTTTTGCT
ACTCATATGGGAGATGGAAAAGGGCGAGTGTTTTTGAACTTCTATCAGGGAGAAATCTTAATGCCGCGATGAAAGAAGCG
AAAGGAGAAAATATAATATCGCGATACACGACAGTAAGGAAAGTTATAAACAAGGGGATTGCTCTGGGTTATATTAAAGA
GTCTGAATACGATCGCTTGGTGTATGATCATGAAGCGCCGTAA
GTGTTATTCATTGTAAGTTCAATTGAAATACTAGCAAATAGGATTATCACAGATGCTGCAAGAAACCAAGCTACAGATAT
TCACATTGTACCAAGAAAGAAAGACACTCTCATTCAAATCCGCTTAACGAACAAACTCATTCCCCGGTTATCACTTCCAA
AAGATGAATGCGACAGATTAATTTCACATTTTAAGTTTACTGCAAATATGGATATCGGAGAACGAAGACGCCCACAAAGC
GGTGCGATTTTTTGTGAGGTGGATGGAAAATTAATGGGTCTTAGACTTTCAACCCTTCCATCTAACAATCGAGAAAGTCT
GGTTATCAGACTATTGCCTCAACAAGAACAGATTCCCTTTCACCAACTCTCACTTTTTCCTGGAATGACCAGAAAACTAC
TTGCCCTTCTAAAACACGCACATGGATTAATTATCTTTACTGGTCCGACCGGATCGGGAAAAACCACAACTCTTTACTCC
CTTTTAAATGAAACCGCACATCTTTTTCATCGTAACGTAATCACACTTGAAGACCCTATCGAAAAAAACTACGATTCTGT
TTTACAAATACAAGTGAATGAAAAAGCGGGCGTAACATACGCTGCTGGCCTTAAGGCGATTCTTCGTCATGATCCCGACA
TTATTATGGTCGGTGAAATACGTGATGCGGAAACGGCTAAAATTGCAGTGCGGGCTGCATTAACGGGACATTTGGTACTC
AGTACAATGCATACAAGGGATGCGAAGGGGGCGGTATATCGTCTCCATGAGTTTGGTGTAAATTGGTTAGAGGTAGAACA
AACCTTAATTGCTGTTACAGCACAACGATTAGTGGAGCTAACATGTCCGTATTGCCAAGGGGAGTGTTCGCCCTTTTGCT
ACTCATATGGGAGATGGAAAAGGGCGAGTGTTTTTGAACTTCTATCAGGGAGAAATCTTAATGCCGCGATGAAAGAAGCG
AAAGGAGAAAATATAATATCGCGATACACGACAGTAAGGAAAGTTATAAACAAGGGGATTGCTCTGGGTTATATTAAAGA
GTCTGAATACGATCGCTTGGTGTATGATCATGAAGCGCCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.183 |
98.611 |
0.564 |
| pilB | Glaesserella parasuis strain SC1401 |
39.773 |
97.778 |
0.389 |