Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QNH48_RS06360 Genome accession   NZ_CP126115
Coordinates   1304815..1305624 (+) Length   269 a.a.
NCBI ID   WP_283954244.1    Uniprot ID   -
Organism   Neobacillus sp. YX16     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1299815..1310624
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH48_RS06330 (QNH48_06330) argH 1300033..1301409 (+) 1377 WP_283954240.1 argininosuccinate lyase -
  QNH48_RS06335 (QNH48_06335) - 1301501..1302361 (+) 861 WP_283954241.1 carbon-nitrogen hydrolase family protein -
  QNH48_RS06340 (QNH48_06340) - 1302382..1303065 (+) 684 WP_283954242.1 GNAT family N-acetyltransferase -
  QNH48_RS06345 (QNH48_06345) - 1303065..1303733 (+) 669 WP_283954243.1 GNAT family N-acetyltransferase -
  QNH48_RS06350 (QNH48_06350) - 1304203..1304391 (-) 189 WP_095249181.1 YfhD family protein -
  QNH48_RS06355 (QNH48_06355) - 1304533..1304667 (-) 135 WP_081825373.1 YfhE family protein -
  QNH48_RS06360 (QNH48_06360) recX 1304815..1305624 (+) 810 WP_283954244.1 recombination regulator RecX Regulator
  QNH48_RS06365 (QNH48_06365) - 1305635..1306312 (-) 678 WP_283954245.1 SDR family oxidoreductase -
  QNH48_RS06370 (QNH48_06370) - 1306398..1306721 (+) 324 WP_133370546.1 YfhH family protein -
  QNH48_RS06375 (QNH48_06375) - 1306770..1306916 (-) 147 WP_133370547.1 YpzG family protein -
  QNH48_RS06380 (QNH48_06380) - 1306934..1307107 (-) 174 WP_133370586.1 small, acid-soluble spore protein K -
  QNH48_RS06385 (QNH48_06385) - 1307246..1307515 (+) 270 WP_133370548.1 YfhJ family protein -
  QNH48_RS06390 (QNH48_06390) - 1307549..1308529 (-) 981 WP_283954246.1 metal-dependent hydrolase -
  QNH48_RS06395 (QNH48_06395) mutY 1308804..1309904 (+) 1101 WP_283954247.1 A/G-specific adenine glycosylase -
  QNH48_RS06400 (QNH48_06400) - 1309933..1310115 (-) 183 WP_095249187.1 hypothetical protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 31560.18 Da        Isoelectric Point: 8.1858

>NTDB_id=836629 QNH48_RS06360 WP_283954244.1 1304815..1305624(+) (recX) [Neobacillus sp. YX16]
MAVITKITTQQKNTDRFNIFMDYGKGEEYAFSVDSAVLIRFELKKGMEIDEFSILEIQFQDDIRKAYNRAVNYLARRMRS
EKEIKDYLAQKEIEEPIIKEVIHKLAAQKYINDEEYALSFVRTQINTTDKGPDLIRMELKERGINEGIIKHAIAVYSVEN
QVEKAIKVAEKLIKKSSKESQRIVKQKAEQFLLRKGYPFDVIHLALTEANTDKEQDEEMEAIRYQGEKTQRKYSNFTGFE
YSQKMKQALFRKGFSMDLIEKYLEEVGKS

Nucleotide


Download         Length: 810 bp        

>NTDB_id=836629 QNH48_RS06360 WP_283954244.1 1304815..1305624(+) (recX) [Neobacillus sp. YX16]
ATGGCTGTTATTACAAAAATCACCACACAGCAGAAAAATACAGATCGCTTTAATATTTTTATGGACTATGGAAAAGGTGA
AGAATATGCCTTTAGTGTTGATAGTGCTGTATTGATTCGATTTGAATTAAAGAAAGGGATGGAGATTGATGAATTTTCCA
TCTTAGAGATACAATTTCAAGACGATATCAGGAAGGCCTATAATCGTGCAGTTAATTATTTGGCAAGAAGAATGAGATCT
GAAAAAGAGATAAAGGACTATCTTGCACAAAAGGAAATAGAAGAACCTATTATTAAAGAAGTTATTCATAAATTAGCTGC
TCAAAAATATATTAATGATGAGGAATATGCCCTTTCTTTTGTAAGAACCCAAATTAATACGACAGATAAAGGTCCAGACT
TAATCCGTATGGAGTTAAAAGAGAGAGGCATCAATGAGGGGATAATCAAACATGCAATAGCGGTTTACTCTGTAGAAAAT
CAAGTTGAAAAAGCTATTAAGGTGGCAGAAAAGTTAATCAAAAAGAGTTCAAAGGAATCTCAACGAATCGTTAAGCAAAA
AGCAGAGCAATTCCTATTAAGGAAGGGCTACCCCTTCGATGTGATTCATCTGGCGCTAACTGAAGCAAATACCGATAAGG
AACAAGATGAGGAAATGGAAGCCATAAGGTATCAAGGCGAAAAAACACAGCGGAAATATAGTAATTTTACCGGTTTTGAA
TACAGCCAAAAAATGAAACAAGCTCTTTTCCGTAAAGGATTTTCAATGGATTTGATTGAAAAATATTTAGAAGAAGTCGG
AAAATCATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(88-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.057

98.513

0.483