Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH48_RS02730 Genome accession   NZ_CP126115
Coordinates   537071..538021 (+) Length   316 a.a.
NCBI ID   WP_283955663.1    Uniprot ID   A0AA95SKJ3
Organism   Neobacillus sp. YX16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 532071..543021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH48_RS02705 (QNH48_02705) - 532525..534285 (-) 1761 WP_283953654.1 ABC transporter ATP-binding protein -
  QNH48_RS02710 (QNH48_02710) - 534407..534769 (+) 363 WP_283953655.1 SMR family transporter -
  QNH48_RS02715 (QNH48_02715) - 534769..535083 (+) 315 WP_095247951.1 multidrug efflux SMR transporter -
  QNH48_RS02720 (QNH48_02720) - 535224..535703 (-) 480 WP_349655114.1 peroxiredoxin -
  QNH48_RS02725 (QNH48_02725) - 535942..536685 (-) 744 WP_283953657.1 C39 family peptidase -
  QNH48_RS02730 (QNH48_02730) ceuB 537071..538021 (+) 951 WP_283955663.1 ABC transporter permease Machinery gene
  QNH48_RS02735 (QNH48_02735) - 538014..538964 (+) 951 WP_283953658.1 iron chelate uptake ABC transporter family permease subunit -
  QNH48_RS02740 (QNH48_02740) - 538961..539722 (+) 762 WP_283953659.1 ABC transporter ATP-binding protein -
  QNH48_RS02745 (QNH48_02745) - 539742..540689 (+) 948 WP_283953660.1 siderophore ABC transporter substrate-binding protein -
  QNH48_RS02750 (QNH48_02750) - 540741..541046 (+) 306 WP_283953661.1 antibiotic biosynthesis monooxygenase -
  QNH48_RS02755 (QNH48_02755) - 541122..541607 (-) 486 WP_283953662.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34802.02 Da        Isoelectric Point: 9.9588

>NTDB_id=836625 QNH48_RS02730 WP_283955663.1 537071..538021(+) (ceuB) [Neobacillus sp. YX16]
MKKRYLLLGLILLSAVSLFVGVSSISPLDLLDFQSEETQIFLISRLPRLIAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANATMLEKMAVAFAFALAGTFLFMQILDRIKFKDAIFIPLVGLMFGNILSSVTTFFAYRADVI
QNMSAWLQGDFSMIMKGRYELLYISLPILIIAYFYANRFTVAGMGEDFSKNLGLAYRQIVNIGLILVALVTTTVVLTVGI
IPFLGLIIPNIISIFKGDHLQKTLPHTALLGAIFLLICDILGRVLIYPYEISISLMVGVIGSGIFLYLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=836625 QNH48_RS02730 WP_283955663.1 537071..538021(+) (ceuB) [Neobacillus sp. YX16]
ATGAAGAAAAGATATTTACTACTAGGATTAATACTCTTATCTGCTGTTTCCTTGTTTGTTGGGGTTAGCAGTATATCACC
ATTGGACTTGTTAGATTTCCAATCTGAGGAGACCCAGATTTTCCTTATCAGCCGACTGCCAAGGCTAATAGCAATCCTGC
TTGCAGGAGCTGGGATGAGTATTGCAGGTTTGATTATGCAACAGCTCAGCCGAAACAAATTTGTTTCACCGACGACGGCA
GGAACTCTTGACGCAACAAGGCTTGGTATCCTTGTTTCAATGCTGTTGTTTGCAAATGCAACCATGCTTGAAAAAATGGC
AGTAGCCTTTGCTTTTGCACTTGCAGGTACATTTTTGTTTATGCAAATTCTTGATCGAATCAAGTTTAAAGATGCTATTT
TCATCCCGCTTGTTGGGTTGATGTTTGGGAATATTTTGTCTTCGGTAACGACTTTTTTCGCGTATCGTGCTGACGTCATT
CAAAATATGTCTGCTTGGCTTCAGGGTGATTTTTCAATGATTATGAAGGGAAGATATGAACTACTTTACATAAGTCTTCC
GATATTAATCATTGCTTATTTCTATGCTAACCGTTTCACTGTGGCTGGTATGGGTGAGGACTTTTCAAAAAATCTTGGGC
TTGCTTATCGCCAGATTGTAAATATTGGTCTGATATTGGTTGCACTGGTGACCACGACGGTTGTTTTGACAGTGGGGATC
ATTCCGTTTTTAGGTTTGATTATTCCAAATATCATATCCATTTTTAAAGGCGACCATTTACAAAAAACATTGCCGCATAC
CGCACTCCTTGGAGCTATTTTCCTTCTGATTTGCGATATATTGGGCCGGGTGCTCATTTATCCATATGAGATTTCGATCA
GTCTCATGGTTGGTGTAATCGGAAGCGGAATTTTCTTATACTTACTGTTCCGGAGGAAGGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.072

97.152

0.525