Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   QNH39_RS07930 Genome accession   NZ_CP126114
Coordinates   1583031..1583978 (+) Length   315 a.a.
NCBI ID   WP_066096241.1    Uniprot ID   A0AA95SA56
Organism   Neobacillus novalis strain XLM17     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1578031..1588978
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH39_RS07910 (QNH39_07910) clpB 1578152..1580746 (+) 2595 WP_066084337.1 ATP-dependent chaperone ClpB -
  QNH39_RS07915 (QNH39_07915) - 1580809..1580994 (-) 186 WP_066084338.1 YjzD family protein -
  QNH39_RS07920 (QNH39_07920) - 1581190..1581912 (+) 723 WP_066084340.1 hydrolase -
  QNH39_RS07925 (QNH39_07925) - 1581997..1582842 (+) 846 WP_066084341.1 hypothetical protein -
  QNH39_RS07930 (QNH39_07930) med 1583031..1583978 (+) 948 WP_066096241.1 BMP family ABC transporter substrate-binding protein Regulator
  QNH39_RS07935 (QNH39_07935) - 1584029..1584325 (-) 297 WP_066084344.1 hypothetical protein -
  QNH39_RS07940 (QNH39_07940) - 1584520..1585452 (+) 933 WP_066084399.1 beta-ketoacyl-ACP synthase III -
  QNH39_RS07945 (QNH39_07945) fabF 1585504..1586742 (+) 1239 WP_066084400.1 beta-ketoacyl-ACP synthase II -
  QNH39_RS07950 (QNH39_07950) - 1587048..1587641 (+) 594 WP_235845466.1 DUF2268 domain-containing protein -
  QNH39_RS07955 (QNH39_07955) - 1587814..1588836 (+) 1023 WP_066084407.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 315 a.a.        Molecular weight: 34916.56 Da        Isoelectric Point: 5.4372

>NTDB_id=836584 QNH39_RS07930 WP_066096241.1 1583031..1583978(+) (med) [Neobacillus novalis strain XLM17]
MLNRFGIILFCLFLLGACGETKSSGKLQKAGLLVPETVNDQVWGTKGFKGMLKVQSKFNIDVFYKEGMNSETVVARAVEE
FNQKGVNLIFGHGSEYAEYFNNISKNYPNIHFVSFNGDAKNSNTTSLNFKAHAMGFFGGMVAAHMSSQQKVGVIAAYEWQ
PEIEGFYQGAKAENKQINVSIEYVGNWDDGKKAVQLVDSMLEDGVDVVYPAGDGFNVPVIERLKERGLFAIGYVSDQSDL
GESTVLTSTIQQVDTLYEKVADQYNNGKLKSGNLSFDFQDDVISLGKYSPLVDKKFIQSMNEQIITYQKTGKLPK

Nucleotide


Download         Length: 948 bp        

>NTDB_id=836584 QNH39_RS07930 WP_066096241.1 1583031..1583978(+) (med) [Neobacillus novalis strain XLM17]
ATGCTGAACCGTTTCGGAATTATTCTTTTTTGTCTTTTTTTACTTGGAGCCTGCGGGGAAACAAAGTCTTCAGGTAAATT
ACAGAAAGCGGGCTTGTTAGTTCCTGAAACTGTCAATGACCAGGTATGGGGTACGAAAGGCTTTAAAGGAATGTTGAAGG
TACAATCAAAATTTAATATAGATGTCTTTTATAAAGAAGGAATGAATTCAGAAACCGTCGTCGCACGAGCGGTAGAAGAA
TTCAATCAAAAAGGAGTAAATCTAATTTTTGGCCACGGTTCTGAGTACGCTGAATATTTCAATAATATTTCCAAAAACTA
TCCCAATATACATTTTGTCAGCTTTAACGGTGATGCAAAAAACTCAAATACAACCAGTTTAAACTTTAAGGCACATGCAA
TGGGTTTTTTTGGCGGGATGGTTGCAGCCCATATGTCCTCACAGCAAAAGGTGGGTGTGATAGCCGCCTATGAATGGCAG
CCGGAGATTGAAGGCTTTTATCAAGGAGCGAAGGCCGAAAATAAACAAATCAATGTCAGTATCGAATACGTTGGCAATTG
GGACGATGGAAAAAAGGCGGTTCAATTAGTTGATTCAATGTTGGAAGATGGTGTCGATGTGGTCTATCCAGCTGGTGACG
GATTTAATGTTCCGGTTATTGAACGGCTTAAGGAACGCGGATTATTTGCTATTGGCTATGTTTCAGATCAGTCTGACCTC
GGGGAATCGACCGTTTTAACAAGCACTATTCAGCAGGTTGATACATTATATGAAAAAGTTGCTGACCAATACAACAATGG
AAAGCTAAAATCGGGTAACCTTTCCTTTGATTTTCAAGATGATGTTATCTCCCTTGGTAAATACAGTCCATTAGTTGATA
AAAAATTTATTCAGAGTATGAATGAACAAATAATAACCTATCAGAAAACAGGAAAATTGCCGAAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

54.286

100

0.543