Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH39_RS03180 Genome accession   NZ_CP126114
Coordinates   649238..650188 (+) Length   316 a.a.
NCBI ID   WP_066095924.1    Uniprot ID   A0AA95SBH5
Organism   Neobacillus novalis strain XLM17     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 644238..655188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH39_RS03165 (QNH39_03165) - 645121..646481 (+) 1361 Protein_576 arsenic transporter -
  QNH39_RS03170 (QNH39_03170) - 646675..647160 (-) 486 WP_066095915.1 hypothetical protein -
  QNH39_RS03175 (QNH39_03175) - 647291..648940 (-) 1650 WP_066095919.1 M20/M25/M40 family metallo-hydrolase -
  QNH39_RS03180 (QNH39_03180) ceuB 649238..650188 (+) 951 WP_066095924.1 ABC transporter permease Machinery gene
  QNH39_RS03185 (QNH39_03185) - 650181..651131 (+) 951 WP_066095928.1 iron chelate uptake ABC transporter family permease subunit -
  QNH39_RS03190 (QNH39_03190) - 651128..651889 (+) 762 WP_066095933.1 ABC transporter ATP-binding protein -
  QNH39_RS03195 (QNH39_03195) - 651908..652864 (+) 957 WP_066095935.1 siderophore ABC transporter substrate-binding protein -
  QNH39_RS03200 (QNH39_03200) - 652934..653470 (-) 537 WP_066095936.1 ribonuclease H-like YkuK family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34591.81 Da        Isoelectric Point: 10.1149

>NTDB_id=836571 QNH39_RS03180 WP_066095924.1 649238..650188(+) (ceuB) [Neobacillus novalis strain XLM17]
MKKRYLLVVLLILSGVSLFVGVSSLSPLDLLDFQSEETQIFLISRMPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVAMLLFANASMLEKMAVAFLFALGGTFLFMQILDRIKFKDAIFIPLVGLMFGNILSSVTTFFAYRADVI
QNMSAWLQGDFSMIMKGRYELLYISIPILIIAYLYANRFTVAGMGEDFSKNLGLGYRRVVNIGLGLVALITATVVLTVGV
IPFLGLIIPNIISIFKGDHLQKTLPHTALAGAIFLLVCDILGRVIIYPYEISISLMVGVIGSGIFLILLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=836571 QNH39_RS03180 WP_066095924.1 649238..650188(+) (ceuB) [Neobacillus novalis strain XLM17]
ATGAAGAAACGATATCTACTAGTTGTGTTACTTATTTTATCAGGGGTTTCTTTGTTTGTTGGTGTTAGCAGTCTATCACC
ATTGGACCTATTAGACTTTCAATCAGAAGAAACGCAGATATTCCTAATCAGCCGCATGCCGCGACTTGTTGCGATTTTAC
TGGCCGGTGCGGGGATGAGTATTGCTGGTTTGATTATGCAGCAGCTCAGCCGGAACAAATTTGTTTCACCGACAACGGCC
GGAACCTTGGATGCCACACGGCTTGGAATCCTGGTTGCAATGTTATTGTTTGCAAACGCATCGATGCTTGAGAAAATGGC
GGTTGCTTTTCTTTTTGCGCTTGGCGGAACCTTTTTATTCATGCAGATTCTCGACCGGATTAAGTTTAAAGATGCGATTT
TTATTCCGCTGGTCGGGCTGATGTTTGGAAATATTTTGTCCTCTGTGACAACCTTTTTCGCCTATCGTGCTGATGTCATT
CAAAATATGTCGGCATGGCTGCAGGGGGATTTTTCGATGATTATGAAAGGTCGTTATGAGCTGCTATACATAAGTATTCC
AATCTTAATAATAGCCTATTTATATGCCAACCGCTTTACCGTAGCGGGCATGGGCGAAGACTTTTCGAAAAATTTGGGTC
TTGGCTACCGCAGGGTTGTGAATATCGGGCTGGGATTGGTCGCCCTGATTACGGCAACAGTTGTCTTAACCGTCGGAGTT
ATCCCATTCCTTGGTTTAATCATTCCGAATATCATCTCGATCTTCAAAGGGGATCATTTACAAAAAACATTACCTCATAC
TGCCTTGGCAGGAGCCATCTTTTTGCTGGTTTGTGATATTTTGGGGCGTGTCATCATCTACCCGTATGAGATTTCAATCA
GTCTCATGGTTGGAGTTATTGGCAGCGGGATCTTCTTAATCCTTCTTTTTAGGAGGAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.396

99.051

0.519