Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH23_RS07415 Genome accession   NZ_CP126113
Coordinates   1415994..1416944 (-) Length   316 a.a.
NCBI ID   WP_120072445.1    Uniprot ID   A0A443IUA0
Organism   Siminovitchia fortis strain XLM16     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1410994..1421944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH23_RS07380 (QNH23_07380) - 1411082..1411552 (+) 471 WP_120072456.1 Hsp20/alpha crystallin family protein -
  QNH23_RS07385 (QNH23_07385) - 1411656..1412924 (+) 1269 WP_120072469.1 MFS transporter -
  QNH23_RS07390 (QNH23_07390) - 1412970..1413155 (-) 186 WP_120072454.1 H-type small acid-soluble spore protein -
  QNH23_RS07395 (QNH23_07395) - 1413146..1413289 (-) 144 WP_164876319.1 hypothetical protein -
  QNH23_RS07400 (QNH23_07400) - 1413307..1414263 (-) 957 WP_120072451.1 siderophore ABC transporter substrate-binding protein -
  QNH23_RS07405 (QNH23_07405) - 1414293..1415054 (-) 762 WP_120072449.1 ATP-binding cassette domain-containing protein -
  QNH23_RS07410 (QNH23_07410) - 1415051..1416001 (-) 951 WP_120072447.1 iron chelate uptake ABC transporter family permease subunit -
  QNH23_RS07415 (QNH23_07415) ceuB 1415994..1416944 (-) 951 WP_120072445.1 ABC transporter permease Machinery gene
  QNH23_RS07420 (QNH23_07420) - 1417124..1417843 (-) 720 WP_120072443.1 EcsC family protein -
  QNH23_RS07425 (QNH23_07425) - 1417961..1419880 (-) 1920 WP_120072441.1 heavy metal translocating P-type ATPase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34801.18 Da        Isoelectric Point: 9.9493

>NTDB_id=836541 QNH23_RS07415 WP_120072445.1 1415994..1416944(-) (ceuB) [Siminovitchia fortis strain XLM16]
MKLKYLLPILLVLCILSLFLGVSNISPLDLLDLQSEETQVFLISRLPRLLSIILAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANATMLEKMAVSFAFALAGSLLFMQILDRIKFKDAIFIPLVGLMFGNILSSVTTFFAYRANAI
QNISAWLQGDFSMIMKGRYELLYISIPVLLLAYLYANRFTLAGMGEDFSKNLGLSYKRIVNIGLILVALITTTVVLTVGM
IPFLGLIIPNIVSIFKGDHLQKTLPHTALLGAIFLLICDILGRVLIYPYEISISLMVGIIGSGIFLYLLFRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=836541 QNH23_RS07415 WP_120072445.1 1415994..1416944(-) (ceuB) [Siminovitchia fortis strain XLM16]
GTGAAACTTAAATATTTATTGCCAATCCTATTGGTATTATGCATTCTATCTTTATTTCTGGGGGTAAGCAACATATCTCC
TCTCGACCTGCTGGATCTTCAATCAGAGGAGACGCAGGTATTCCTTATCAGCCGCCTGCCGAGATTGCTTTCGATTATAT
TAGCGGGAGCGGGCATGAGCATTGCAGGCCTCATCATGCAGCAGTTGAGCCGTAATAAATTTGTTTCACCGACCACAGCA
GGTACGCTCGATGCAACAAGACTGGGAATCCTCGTTTCCATGCTATTGTTTGCCAATGCGACGATGCTGGAAAAAATGGC
GGTTTCGTTCGCCTTTGCCCTTGCGGGATCCCTGTTGTTCATGCAGATTCTTGACCGAATCAAATTCAAGGATGCAATCT
TTATTCCGCTGGTCGGGCTCATGTTCGGCAATATTTTATCATCGGTCACAACGTTTTTCGCATATCGGGCTAATGCCATA
CAAAATATCTCTGCCTGGCTGCAAGGGGATTTCTCCATGATCATGAAAGGACGCTACGAGCTGCTGTATATCAGTATACC
TGTCCTTTTACTGGCATACTTATATGCCAATCGGTTTACTCTGGCCGGAATGGGAGAGGATTTTTCGAAAAATCTGGGGC
TGTCCTATAAGCGAATTGTCAATATCGGACTGATTTTAGTGGCCTTGATTACAACAACAGTTGTTTTGACAGTTGGAATG
ATCCCGTTTCTTGGTTTGATCATTCCGAATATCGTGTCAATTTTCAAAGGCGACCATCTGCAAAAAACATTGCCGCATAC
AGCTTTGCTCGGAGCGATTTTTCTCCTCATTTGTGACATTTTGGGACGCGTTCTCATTTATCCTTACGAGATATCCATCA
GTTTGATGGTGGGAATTATCGGCAGCGGCATATTCTTATATTTGCTTTTCAGGAGGAAGGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A443IUA0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525