Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH37_RS25940 Genome accession   NZ_CP126112
Coordinates   5374500..5375450 (-) Length   316 a.a.
NCBI ID   WP_076368205.1    Uniprot ID   A0A9X8WKJ9
Organism   Peribacillus simplex strain WH6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5369500..5380450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH37_RS25925 (QNH37_25925) - 5371652..5372599 (-) 948 WP_283899437.1 siderophore ABC transporter substrate-binding protein -
  QNH37_RS25930 (QNH37_25930) - 5372808..5373566 (-) 759 WP_283899439.1 ABC transporter ATP-binding protein -
  QNH37_RS25935 (QNH37_25935) - 5373560..5374507 (-) 948 WP_283899441.1 iron chelate uptake ABC transporter family permease subunit -
  QNH37_RS25940 (QNH37_25940) ceuB 5374500..5375450 (-) 951 WP_076368205.1 ABC transporter permease Machinery gene
  QNH37_RS25945 (QNH37_25945) - 5375715..5376056 (+) 342 WP_283899443.1 DUF1450 domain-containing protein -
  QNH37_RS25950 (QNH37_25950) - 5376274..5377926 (+) 1653 WP_283899445.1 M14 family metallocarboxypeptidase -
  QNH37_RS25955 (QNH37_25955) shc 5378095..5379990 (+) 1896 WP_283899447.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34894.21 Da        Isoelectric Point: 9.5025

>NTDB_id=836506 QNH37_RS25940 WP_076368205.1 5374500..5375450(-) (ceuB) [Peribacillus simplex strain WH6]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLDLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYVSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKLIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=836506 QNH37_RS25940 WP_076368205.1 5374500..5375450(-) (ceuB) [Peribacillus simplex strain WH6]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
CCTGGATTTATTGGATCTAAGTGATGATAAAGTGCAAATCATGTTGCAAAGCCGTTTCCCCAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCC
GGAACCATGGATTCCGCAAGGCTTGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATTT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTCGGATCCATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGAGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATGTAAGTATCCC
TCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGTGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGCTTATAGTCAATTTTGGGTTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCCCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCAGTATTCCTATTGATCTGCGATATTCTGGGCAGGATCCTCATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50

100

0.5