Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   QNH20_RS06430 Genome accession   NZ_CP126110
Coordinates   1390907..1391716 (+) Length   269 a.a.
NCBI ID   WP_283922085.1    Uniprot ID   A0AA95MG21
Organism   Neobacillus sp. WH10     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1385907..1396716
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH20_RS06405 (QNH20_06405) - 1387246..1388517 (+) 1272 WP_283922080.1 glycosyltransferase -
  QNH20_RS06410 (QNH20_06410) - 1388537..1389226 (+) 690 WP_283922081.1 glycosyltransferase family A protein -
  QNH20_RS06415 (QNH20_06415) - 1389567..1390070 (+) 504 WP_283922082.1 DoxX family protein -
  QNH20_RS06420 (QNH20_06420) - 1390181..1390369 (-) 189 WP_283922083.1 YfhD family protein -
  QNH20_RS06425 (QNH20_06425) - 1390476..1390610 (-) 135 WP_283922084.1 YfhE family protein -
  QNH20_RS06430 (QNH20_06430) recX 1390907..1391716 (+) 810 WP_283922085.1 recombination regulator RecX Regulator
  QNH20_RS06435 (QNH20_06435) - 1391726..1392403 (-) 678 WP_283922086.1 SDR family NAD(P)-dependent oxidoreductase -
  QNH20_RS06440 (QNH20_06440) - 1392634..1392957 (+) 324 WP_283922087.1 YfhH family protein -
  QNH20_RS06445 (QNH20_06445) - 1393003..1393179 (-) 177 WP_283922088.1 small, acid-soluble spore protein K -
  QNH20_RS06450 (QNH20_06450) - 1393347..1394327 (-) 981 WP_283922089.1 metal-dependent hydrolase -
  QNH20_RS06455 (QNH20_06455) mutY 1394552..1395643 (+) 1092 WP_283922090.1 A/G-specific adenine glycosylase -
  QNH20_RS06460 (QNH20_06460) - 1395691..1395873 (-) 183 WP_283922091.1 hypothetical protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 31767.53 Da        Isoelectric Point: 5.7990

>NTDB_id=836428 QNH20_RS06430 WP_283922085.1 1390907..1391716(+) (recX) [Neobacillus sp. WH10]
MAIITKITTQQKNQDRFNVFMDHGKGEEFAFSVDSDVLIKFQLKKGMELDDFSFLEIQYQDDIRKAYNLAVNYLARRMRS
EKEIKDYLVKKEMDEPIIEEVIHKLIAQKYINDEEYAFAYVRTQANTTDKGPAVIKMELKEKGIDEKILLHALEELPLEQ
QIEKVAKICEKFFQKHTKESIKVQKQKLENVLLRKGYSFEVITIAMNETEVPKEADEEMDAIRFQGEKAHRRLSQLNGYE
YQQKMKQALYRKGFSIDLIERFLTEIENS

Nucleotide


Download         Length: 810 bp        

>NTDB_id=836428 QNH20_RS06430 WP_283922085.1 1390907..1391716(+) (recX) [Neobacillus sp. WH10]
ATGGCCATTATTACAAAAATCACCACGCAGCAGAAAAATCAAGATCGTTTTAATGTGTTTATGGATCATGGCAAGGGTGA
AGAATTTGCTTTTAGTGTCGACAGCGATGTATTAATTAAATTTCAATTAAAAAAAGGTATGGAGCTAGATGATTTTTCTT
TCTTGGAAATTCAATATCAAGATGACATTCGCAAAGCGTACAATCTAGCCGTCAACTATTTAGCTAGAAGAATGAGATCT
GAAAAAGAGATAAAGGATTATCTTGTTAAAAAAGAAATGGACGAACCTATTATCGAAGAAGTTATACATAAATTGATCGC
TCAAAAATACATTAATGACGAGGAATATGCCTTTGCCTACGTAAGGACACAAGCTAATACAACTGATAAAGGCCCTGCTG
TAATCAAAATGGAATTAAAGGAAAAAGGAATTGATGAGAAAATCCTCTTACACGCGCTTGAAGAATTACCTTTAGAGCAA
CAAATAGAAAAAGTAGCTAAGATATGCGAAAAGTTTTTTCAAAAGCATACTAAGGAATCAATTAAAGTCCAAAAGCAAAA
ACTGGAGAATGTACTGCTTAGAAAAGGATATTCTTTTGAAGTCATTACTATTGCTATGAATGAAACTGAAGTGCCAAAAG
AGGCTGATGAGGAAATGGACGCTATCAGATTTCAAGGTGAAAAGGCACATCGGAGACTTTCTCAATTAAATGGATATGAA
TATCAACAAAAGATGAAACAAGCTTTATATAGGAAAGGGTTTTCAATAGATCTAATAGAACGGTTCCTCACGGAAATAGA
AAACTCATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(89-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

48.689

99.257

0.483