Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   QNH17_RS06905 Genome accession   NZ_CP126107
Coordinates   1438823..1439011 (+) Length   62 a.a.
NCBI ID   WP_283879448.1    Uniprot ID   A0AA95M7V1
Organism   Neobacillus sp. SuZ13     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1433823..1444011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH17_RS06885 (QNH17_06885) clpB 1434031..1436625 (+) 2595 WP_283878005.1 ATP-dependent chaperone ClpB -
  QNH17_RS06890 (QNH17_06890) - 1436667..1436852 (-) 186 WP_283878006.1 YjzD family protein -
  QNH17_RS06895 (QNH17_06895) - 1437088..1437810 (+) 723 WP_283878007.1 hydrolase -
  QNH17_RS06900 (QNH17_06900) - 1437890..1438729 (+) 840 WP_283878008.1 hypothetical protein -
  QNH17_RS06905 (QNH17_06905) comZ 1438823..1439011 (+) 189 WP_283879448.1 ComZ family protein Regulator
  QNH17_RS06910 (QNH17_06910) - 1439175..1440107 (+) 933 WP_144553626.1 beta-ketoacyl-ACP synthase III -
  QNH17_RS06915 (QNH17_06915) fabF 1440153..1441391 (+) 1239 WP_144553628.1 beta-ketoacyl-ACP synthase II -
  QNH17_RS06920 (QNH17_06920) - 1441509..1442309 (+) 801 WP_283878009.1 DUF2268 domain-containing protein -
  QNH17_RS06925 (QNH17_06925) - 1442445..1443470 (+) 1026 WP_283878010.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7175.41 Da        Isoelectric Point: 4.3189

>NTDB_id=836286 QNH17_RS06905 WP_283879448.1 1438823..1439011(+) (comZ) [Neobacillus sp. SuZ13]
MSQDKSLEFMQIAMKYLPEAKEQLDKAGVELSMDLIQPFMNLFTKVMQEAYELGLAEGRKEM

Nucleotide


Download         Length: 189 bp        

>NTDB_id=836286 QNH17_RS06905 WP_283879448.1 1438823..1439011(+) (comZ) [Neobacillus sp. SuZ13]
ATAAGTCAGGATAAATCTCTAGAATTTATGCAGATCGCGATGAAATACTTACCCGAAGCTAAAGAACAATTGGACAAGGC
AGGCGTTGAATTATCAATGGATTTAATCCAGCCGTTCATGAACCTTTTTACAAAGGTTATGCAAGAGGCATACGAACTCG
GGTTAGCTGAAGGACGTAAAGAAATGTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

98.387

0.71