Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH17_RS02310 Genome accession   NZ_CP126107
Coordinates   468392..469342 (+) Length   316 a.a.
NCBI ID   WP_283877212.1    Uniprot ID   A0AA95M5P3
Organism   Neobacillus sp. SuZ13     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 463392..474342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH17_RS02280 (QNH17_02280) - 463614..464300 (-) 687 WP_283877207.1 amino acid ABC transporter permease -
  QNH17_RS02285 (QNH17_02285) - 464315..465115 (-) 801 WP_283877208.1 amino acid ABC transporter substrate-binding protein -
  QNH17_RS02290 (QNH17_02290) - 465286..465654 (-) 369 WP_283877209.1 SET domain-containing protein -
  QNH17_RS02295 (QNH17_02295) - 465974..466171 (+) 198 WP_349632580.1 histidine phosphatase family protein -
  QNH17_RS02300 (QNH17_02300) - 466536..467549 (+) 1014 WP_283877210.1 DUF418 domain-containing protein -
  QNH17_RS02305 (QNH17_02305) - 467646..468128 (-) 483 WP_283877211.1 hypothetical protein -
  QNH17_RS02310 (QNH17_02310) ceuB 468392..469342 (+) 951 WP_283877212.1 ABC transporter permease Machinery gene
  QNH17_RS02315 (QNH17_02315) - 469335..470285 (+) 951 WP_283877213.1 iron chelate uptake ABC transporter family permease subunit -
  QNH17_RS02320 (QNH17_02320) - 470282..471043 (+) 762 WP_283877214.1 ABC transporter ATP-binding protein -
  QNH17_RS02325 (QNH17_02325) - 471062..472009 (+) 948 WP_283877215.1 siderophore ABC transporter substrate-binding protein -
  QNH17_RS02330 (QNH17_02330) - 472451..473845 (+) 1395 WP_283877216.1 M28 family peptidase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34772.85 Da        Isoelectric Point: 9.8027

>NTDB_id=836277 QNH17_RS02310 WP_283877212.1 468392..469342(+) (ceuB) [Neobacillus sp. SuZ13]
MKKRYLLLALIILSATSLFVGVSSLSPLDLLDFQTEETQIFLVSRVPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANATMLEKMAVAFVFALGGTFLFMQILDRIKFKDAIYIPLIGLMFGNILSSVTTFFAYRADVI
QNMSAWLQGDFSMIMKGRYELLYISIPILVIAYFYANRFTVAGMGEDFSKNLGLAYRSVVNIGLILVALITASVVLTVGI
IPFLGLIIPNIISIFKGDHLQKTLPHTAFLGAIFLLVCDILGRVLIYPYEISISLMVGVIGSGTFLYLLFWRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=836277 QNH17_RS02310 WP_283877212.1 468392..469342(+) (ceuB) [Neobacillus sp. SuZ13]
ATGAAGAAACGATATTTACTGTTAGCGTTAATAATCTTATCTGCAACCTCGCTATTTGTAGGTGTTAGCAGTCTTTCGCC
ATTAGACTTGCTAGACTTTCAAACAGAGGAGACACAAATTTTCTTGGTGAGCAGGGTACCGAGACTCGTTGCGATTCTAC
TCGCGGGGGCTGGGATGAGTATCGCCGGATTGATTATGCAGCAACTGAGCCGGAACAAATTTGTTTCTCCTACAACCGCT
GGAACCTTGGATGCCACCCGACTTGGAATCCTTGTCTCCATGTTGTTATTTGCCAATGCAACTATGCTTGAAAAAATGGC
TGTAGCCTTTGTGTTTGCGCTTGGGGGAACCTTTTTATTCATGCAGATTCTTGACCGAATCAAGTTTAAGGATGCCATTT
ATATTCCACTGATTGGTTTAATGTTCGGTAATATTTTGTCATCGGTTACCACCTTTTTTGCTTACCGAGCAGATGTCATT
CAAAATATGTCGGCCTGGCTTCAAGGGGATTTTTCGATGATTATGAAAGGTCGTTATGAACTTCTCTACATAAGTATCCC
AATTTTAGTCATTGCCTATTTTTATGCCAACCGCTTTACCGTGGCAGGGATGGGTGAGGATTTTTCAAAAAATCTAGGTC
TTGCCTATCGAAGTGTGGTAAATATCGGGTTGATACTTGTTGCACTAATTACGGCATCCGTTGTCCTGACCGTCGGAATT
ATCCCATTTCTTGGCTTAATTATTCCGAATATTATCTCTATTTTCAAAGGTGACCATTTACAAAAAACGTTGCCGCATAC
CGCATTTCTAGGGGCTATTTTCCTCTTGGTTTGTGATATTTTAGGCAGGGTGCTCATTTATCCATATGAGATTTCAATCA
GTCTCATGGTTGGTGTGATCGGCAGCGGAACGTTCTTATATTTGCTTTTTTGGAGGAAGGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.757

99.051

0.513