Detailed information NTG0836272

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: U8P28_RS23665
• Genome accession: NZ_CP141100
• Coordinates: 4796174..4797157 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain KE40
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4791174..4802157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U8P28_RS23645 (U8P28_23645)	-	4792806..4792913 (-)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-
U8P28_RS23650 (U8P28_23650)	-	4793289..4793396 (-)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
U8P28_RS23655 (U8P28_23655)	yhjV	4793872..4795143 (+)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
U8P28_RS23660 (U8P28_23660)	dppF	4795173..4796177 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
U8P28_RS23665 (U8P28_23665)	amiE	4796174..4797157 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
U8P28_RS23670 (U8P28_23670)	dppC	4797168..4798070 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
U8P28_RS23675 (U8P28_23675)	dppB	4798080..4799099 (-)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
U8P28_RS23680 (U8P28_23680)	dppA	4799250..4800857 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=836272 U8P28_RS23665 WP_001196486.1 4796174..4797157(-) (amiE) [Escherichia coli strain KE40]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=836272 U8P28_RS23665 WP_001196486.1 4796174..4797157(-) (amiE) [Escherichia coli strain KE40]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404