Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH43_RS25820 Genome accession   NZ_CP126106
Coordinates   5406659..5407609 (-) Length   316 a.a.
NCBI ID   WP_076368205.1    Uniprot ID   A0A9X8WKJ9
Organism   Peribacillus simplex strain RZ14     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 5401659..5412609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH43_RS25805 (QNH43_25805) - 5403811..5404758 (-) 948 WP_283916223.1 siderophore ABC transporter substrate-binding protein -
  QNH43_RS25810 (QNH43_25810) - 5404967..5405725 (-) 759 WP_076368203.1 ABC transporter ATP-binding protein -
  QNH43_RS25815 (QNH43_25815) - 5405719..5406666 (-) 948 WP_076368204.1 iron chelate uptake ABC transporter family permease subunit -
  QNH43_RS25820 (QNH43_25820) ceuB 5406659..5407609 (-) 951 WP_076368205.1 ABC transporter permease Machinery gene
  QNH43_RS25825 (QNH43_25825) - 5407946..5408215 (+) 270 WP_283916224.1 DUF1450 domain-containing protein -
  QNH43_RS25830 (QNH43_25830) - 5408435..5410084 (+) 1650 WP_283916225.1 M14 family metallocarboxypeptidase -
  QNH43_RS25835 (QNH43_25835) shc 5410251..5412146 (+) 1896 WP_283916226.1 squalene--hopene cyclase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34894.21 Da        Isoelectric Point: 9.5025

>NTDB_id=836256 QNH43_RS25820 WP_076368205.1 5406659..5407609(-) (ceuB) [Peribacillus simplex strain RZ14]
MKIRYLVMALIVLSFTSLFIGVKDITPLDLLDLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYVSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKLIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=836256 QNH43_RS25820 WP_076368205.1 5406659..5407609(-) (ceuB) [Peribacillus simplex strain RZ14]
ATGAAGATAAGATATTTAGTCATGGCGTTAATTGTTTTGTCATTTACGTCATTATTCATTGGTGTAAAGGATATTACCCC
CCTGGATTTATTGGATCTAAGTGATGATAAGGTGCAAATCATGCTGCAAAGCCGTTTCCCCAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCC
GGAACCATGGATTCCGCTAGGCTTGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCGGCACTCATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATTT
TCATTCCCTTGGTTGGTTTGATGTTCGGTAATATCGTCGGATCCATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACATGGATGAATGGGGATTTCTCGATGATCATGTCGGGAAGGTACGAACTTATATATGTAAGTATCCC
TCTGGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGTGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGCTTATAGTCAATTTTGGGTTGATCATCGTGGCATTATCCTCCACTGTCGTTCTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCCCTTTACCTTGGCGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTGCTAGGGGCAGTATTCCTATTGATCTGCGATATTCTGGGCAGGATCCTCATATATCCATTTGAAATCCCGATCG
GGCTCGTGGTTGGTGTGATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50

100

0.5